Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p26990 Brassica napus
Aa31LG7G11580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3366 Anthoceros agrestis
Actinidia06455 Actinidia chinensis
Actinidia22279 Actinidia chinensis
Ah.12g060390 Amaranthus hybridus
AL4G15860 Arabidopsis lyrata
Aqoxy7G03277 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.VKSA8D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZP8Y56 Arachis hypogaea
AT2G24820 Arabidopsis thaliana
ATR0580G386 Amborella trichopoda
Atru.BG.19.p Acer truncatum
AUR62024771 Chenopodium quinoa
AUR62025751 Chenopodium quinoa
AUR62032447 Chenopodium quinoa
BcaB01g02999 Brassica carinata
BcaB01g03000 Brassica carinata
BolC3t15580H Brassica oleracea
BraA03t11910Z Brassica rapa
C03p32390 Brassica napus
CAN.G566.49 Capsicum annuum
CANSAT25G1628 Cannabis sativa
CARHR294570 Cardamine hirsuta
Carub.0004s0444 Capsella rubella
Ca_15787_v3 Cicer arietinum L.
CBR_g19416 Chara braunii
CBR_g19419 Chara braunii
CBR_g19421 Chara braunii
CBR_g3534 Chara braunii
Cc08_g06700 Coffea canephora
CDE04G1965 Ceratophyllum demersum
CDE07G1427 Ceratophyllum demersum
Cfa013013 Carpinus fangiana
Ciclev10007702m.g Citrus clementina
Ciclev10007965m.g Citrus clementina
CiPaw.07G232800 Carya illinoinensis
CiPaw.08G004400 Carya illinoinensis
ClCG05G016090 Citrullus lanatus
COL.COLO4_18970 Corchorus olitorius
Cpa.g.sc148.47 Carica papaya
CsaV3_4G036370 Cucumis sativus L.
CSS0007167 Camellia sinensis var. sinensis
CSS0018677 Camellia sinensis var. sinensis
CSS0034347 Camellia sinensis var. sinensis
CSS0043219 Camellia sinensis var. sinensis
DCAR_004584 Daucus carota
Dinv16415 Davidia involucrata
Duzib187G1480 Durio zibethinus
ECA246G4066 Erigeron canadensis
EL10Ac2g02451 Beta vulgaris
EL10Ac2g02452 Beta vulgaris
Eucgr.C04031 Eucalyptus grandis
FAN15G1263 Fragaria x ananassa
FAN27G3317 Fragaria x ananassa
FvH4_2g41330 Fragaria vesca
Glyma.04G059800 Glycine max
Glyma.06G060200 Glycine max
Glyma.17G221500 Glycine max
Gohir.A05G060800 Gossypium hirsutum
Gohir.D05G063000 Gossypium hirsutum
Gorai.009G064000 Gossypium raimondii
GSVIVG01036007001 Vitis vinifera
HanXRQChr17g0536341 Helianthus annuus
Hma1.2p1_0392F.1_g142980 Hydrangea macrophylla
HPP92_017165 Vanilla planifolia
Hund02973 Selenicereus undatus
Lalb_Chr08g0244481 Lupinus albus
Lj1g0021239 Lotus japonicus
Lj7A738T100 Lonicera japonica
Lsat_1_v5_gn_3_22540 Lactuca sativa
Manes.16G132300 Manihot esculenta
Mapoly0030s0036 Marchantia polymorpha
Mapoly0030s0137 Marchantia polymorpha
MBI15_g07484_MAGBIO Magnolia biondii
MD08G1051400 Malus domestica
MD08G1051600 Malus domestica
Medtr3g105820 Medicago truncatula
MELO3C016944.2 Cucumis melo
Migut.A00391 Erythranthe guttata
Nitab4.5_0000668g0080 Nicotiana tabacum
Nitab4.5_0001110g0090 Nicotiana tabacum
Nn2g12480 Nelumbo nucifera
Oeu048541.1 Olea europaea
Os02g0792800 Oryza sativa ssp. japonica
Peaxi162Scf00459g00119 Petunia axillaris
PGR044G1085 Punica granatum
PGSC0003DMG401029274 Solanum tuberosum
Phvul.009G086000 Phaseolus vulgaris
Potri.006G267300 Populus trichocarpa
Potri.018G015700 Populus trichocarpa
Pp3c11_12710 Physcomitrium patens
Pp3c7_15550 Physcomitrium patens
Prupe.1G397100 Prunus persica
Prupe.1G397200 Prunus persica
Psat5g033120 Pisum sativum
PSO063G6900 Papaver somniferum
PSO782G5236 Papaver somniferum
QL02p018077 Quercus lobata
RcHm_v2.0_Chr6g0299151 Rosa chinensis
Rhsim02G0217800 Rhododendron simsii
Rhsim02G0217900 Rhododendron simsii
Sabra06G0209600 Salix brachista
Sabra18G0019000 Salix brachista
SalBow4G1746 Salvia bowleyana
Sc06g0000310 Simmondsia chinensis
Sc06g0000320 Simmondsia chinensis
Sed0027737 Sechium edule
SGA_v2.0_scaffold27G11633 Striga asiatica
Solyc12g096550.2 Solanum lycopersicum
Sopen12g032380 Solanum pennellii
Sp4g03840 Schrenkiella parvula
TAR626G1257 Trochodendron aralioides
THA.LOC104803608 Tarenaya hassleriana
Thecc.09G013700 Theobroma cacao
Thhalv10000113m.g Eutrema salsugineum
TPR.G1896 Trifolium pratense
TWI32G0797 Tripterygium wilfordii
TWI34G0371 Tripterygium wilfordii
vmacro11276 Vaccinium macrocarpon
VMungo1309G0760 Vigna mungo
Zm00001eb257630 Zea mays

User provided reference genes

Program Settings