Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia02879 Actinidia chinensis
Actinidia03892 Actinidia chinensis
Actinidia06180 Actinidia chinensis
Actinidia32043 Actinidia chinensis
Actinidia37742 Actinidia chinensis
Actinidia37743 Actinidia chinensis
Ah.08g210060 Amaranthus hybridus
Ah.08g210070 Amaranthus hybridus
ATR0772G224 Amborella trichopoda
Atru.chr8.1373 Acer truncatum
AUR62006282 Chenopodium quinoa
AUR62026332 Chenopodium quinoa
CAN.G1245.7 Capsicum annuum
Ca_11701_v3 Cicer arietinum L.
CBR_g27764 Chara braunii
Cc06_g06500 Coffea canephora
Cfa020025 Carpinus fangiana
Ciclev10012818m.g Citrus clementina
CiPaw.09G020600 Carya illinoinensis
ClCG10G018390 Citrullus lanatus
COL.COLO4_29582 Corchorus olitorius
Cpa.g.sc104.37 Carica papaya
CsaV3_3G037910 Cucumis sativus L.
DCAR_009176 Daucus carota
DCAR_020707 Daucus carota
Dinv31755 Davidia involucrata
ECA233G1347 Erigeron canadensis
ECA233G3888 Erigeron canadensis
ECA233G5218 Erigeron canadensis
ECA248G2186 Erigeron canadensis
EL10Ac7g16802 Beta vulgaris
Eucgr.K02617 Eucalyptus grandis
FAN02G1136 Fragaria x ananassa
FAN05G0285 Fragaria x ananassa
FAN05G2168 Fragaria x ananassa
FAN09G3875 Fragaria x ananassa
FAN14G0555 Fragaria x ananassa
FvH4_6g20260 Fragaria vesca
Glyma.02G197300 Glycine max
Glyma.03G201700 Glycine max
Glyma.10G081100 Glycine max
Gohir.A09G134600 Gossypium hirsutum
Gohir.D09G131100 Gossypium hirsutum
Gorai.006G149800 Gossypium raimondii
HanXRQChr01g0025661 Helianthus annuus
HanXRQChr09g0239941 Helianthus annuus
HanXRQChr13g0398381 Helianthus annuus
HanXRQChr16g0532971 Helianthus annuus
Haze_20191 Corylus avellana
HPP92_025143 Vanilla planifolia
HPP92_026079 Vanilla planifolia
Lalb_Chr01g0017871 Lupinus albus
Lalb_Chr20g0111401 Lupinus albus
Lalb_Chr25g0288011 Lupinus albus
Lj5g0024854 Lotus japonicus
Lsat_1_v5_gn_1_57020 Lactuca sativa
Lsat_1_v5_gn_1_58041 Lactuca sativa
Lsat_1_v5_gn_2_55400 Lactuca sativa
Manes.08G033000 Manihot esculenta
Manes.09G044900 Manihot esculenta
Mapoly0048s0108 Marchantia polymorpha
MD12G1039700 Malus domestica
MD14G1038300 Malus domestica
Medtr1g057590 Medicago truncatula
Medtr1g057600 Medicago truncatula
MELO3C009534.2 Cucumis melo
Migut.J00707 Erythranthe guttata
Nitab4.5_0000020g0090 Nicotiana tabacum
Nitab4.5_0001287g0020 Nicotiana tabacum
Nitab4.5_0005325g0010 Nicotiana tabacum
Nitab4.5_0010913g0010 Nicotiana tabacum
Nn1g01483 Nelumbo nucifera
Nn1g07256 Nelumbo nucifera
Nn2g13712 Nelumbo nucifera
Nn2g14294 Nelumbo nucifera
Nn3g18010 Nelumbo nucifera
Nn6g34702 Nelumbo nucifera
Nn8g40734 Nelumbo nucifera
Oeu006273.1 Olea europaea
Os04g0685700 Oryza sativa ssp. japonica
Os06g0688850 Oryza sativa ssp. japonica
Peaxi162Scf00211g00105 Petunia axillaris
Peaxi162Scf00388g01015 Petunia axillaris
PGSC0003DMG400016423 Solanum tuberosum
PGSC0003DMG400028148 Solanum tuberosum
Phvul.007G268300 Phaseolus vulgaris
Pp3c10_10040 Physcomitrium patens
Pp3c14_22420 Physcomitrium patens
Prupe.7G095200 Prunus persica
Psat6g114400 Pisum sativum
Psat6g114480 Pisum sativum
QL07p036825 Quercus lobata
RcHm_v2.0_Chr3g0475851 Rosa chinensis
Rhsim03G0065800 Rhododendron simsii
Sabra06G0157000 Salix brachista
SalBow5G4860 Salvia bowleyana
Sc02g0000610 Simmondsia chinensis
Sc20g0006720 Simmondsia chinensis
Sed0014531 Sechium edule
Sed0025399 Sechium edule
SEGI_18590 Sequoiadendron giganteum
SEGI_34425 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06627 Striga asiatica
SGA_v2.0_scaffold31G12846 Striga asiatica
SGA_v2.0_scaffold35G14013 Striga asiatica
SMO119G0030 Selaginella moellendorffii
SMO201G0051 Selaginella moellendorffii
Solyc01g007190.3 Solanum lycopersicum
Solyc10g081930.1 Solanum lycopersicum
Sopen01g003170 Solanum pennellii
Sopen10g032440 Solanum pennellii
TAR623G1722 Trochodendron aralioides
TAR633G2246 Trochodendron aralioides
Thecc.05G103600 Theobroma cacao
TPR.G2776 Trifolium pratense
TWI74G0793 Tripterygium wilfordii
unitig_22.g5144 Utricularia gibba
unitig_578.g16474 Utricularia gibba
VMungo0720G1866 Vigna mungo
VMungo0838G0001 Vigna mungo
Zm00001eb065580 Zea mays
Zm00001eb379700 Zea mays
Zm00001eb434190 Zea mays

User provided reference genes

Program Settings