Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p21860 Brassica napus
A07p19270 Brassica napus
Aa31LG5G7410 Aethionema arabicum
Ah.08g210710 Amaranthus hybridus
Ah.08g219210 Amaranthus hybridus
Ah.15g096840 Amaranthus hybridus
AL4G23320 Arabidopsis lyrata
Aqoxy4G02961 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.LS9MUN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W0TF53 Arachis hypogaea
AT2G28790 Arabidopsis thaliana
ATR0105G016 Amborella trichopoda
ATR0559G080 Amborella trichopoda
Atru.chr3.3848 Acer truncatum
AUR62001811 Chenopodium quinoa
BcaB02g10203 Brassica carinata
BcaB06g28251 Brassica carinata
BcaC02g08137 Brassica carinata
BcaC02g11011 Brassica carinata
BolC4t23742H Brassica oleracea
BolC4t27324H Brassica oleracea
BraA04t17752Z Brassica rapa
BraA07t29634Z Brassica rapa
C04p22210 Brassica napus
C04p57980 Brassica napus
CAN.G901.6 Capsicum annuum
CANSAT54G1310 Cannabis sativa
CARHR121930 Cardamine hirsuta
Carub.0004s0978 Capsella rubella
Ca_19178_v3 Cicer arietinum L.
Cc01_g12640 Coffea canephora
CDE04G2828 Ceratophyllum demersum
CDE06G0650 Ceratophyllum demersum
CDE07G0570 Ceratophyllum demersum
Cfa010036 Carpinus fangiana
Cfa011477 Carpinus fangiana
Ciclev10029149m.g Citrus clementina
CiPaw.13G096800 Carya illinoinensis
ClCG03G001660 Citrullus lanatus
Cpa.g.sc190.4 Carica papaya
CsaV3_1G034010 Cucumis sativus L.
CSS0035879 Camellia sinensis var. sinensis
DCAR_015614 Daucus carota
DCAR_018899 Daucus carota
Dinv01574 Davidia involucrata
Duzib150G0041 Durio zibethinus
Duzib168G0615 Durio zibethinus
ECA247G1128 Erigeron canadensis
Eucgr.J02061 Eucalyptus grandis
FAN11G4023 Fragaria x ananassa
FAN21G0852 Fragaria x ananassa
FvH4_3g35670 Fragaria vesca
Glyma.11G140800 Glycine max
Glyma.12G064300 Glycine max
Gohir.A03G040400 Gossypium hirsutum
Gohir.A05G096900 Gossypium hirsutum
Gohir.D03G127600 Gossypium hirsutum
Gohir.D05G097000 Gossypium hirsutum
Gorai.003G134300 Gossypium raimondii
Gorai.009G100600 Gossypium raimondii
HanXRQChr15g0493261 Helianthus annuus
Haze_23397 Corylus avellana
Haze_24064 Corylus avellana
Hma1.2p1_0035F.1_g022240 Hydrangea macrophylla
Lalb_Chr19g0137771 Lupinus albus
Lj3g0026793 Lotus japonicus
Lsat_1_v5_gn_9_22780 Lactuca sativa
Manes.11G132100 Manihot esculenta
MBI14_g11689_MAGBIO Magnolia biondii
MD00G1137700 Malus domestica
MD02G1183000 Malus domestica
Medtr4g063630 Medicago truncatula
MELO3C020653.2 Cucumis melo
Migut.A01135 Erythranthe guttata
MSTRG.25516 Avicennia marina
Nitab4.5_0000610g0010 Nicotiana tabacum
Nitab4.5_0007816g0020 Nicotiana tabacum
Nn2g12795 Nelumbo nucifera
Oeu059459.1 Olea europaea
Os01g0839900 Oryza sativa ssp. japonica
Os12g0569300 Oryza sativa ssp. japonica
Peaxi162Scf00406g00317 Petunia axillaris
PGR119G1159 Punica granatum
PGSC0003DMG400000402 Solanum tuberosum
Phvul.011G065300 Phaseolus vulgaris
Potri.001G237600 Populus trichocarpa
Potri.009G028800 Populus trichocarpa
Prupe.6G080600 Prunus persica
Psat7g217600 Pisum sativum
PSO339G5778 Papaver somniferum
PSO384G2979 Papaver somniferum
QL01p032673 Quercus lobata
QL01p032719 Quercus lobata
RcHm_v2.0_Chr5g0063831 Rosa chinensis
Rhsim01G0226400 Rhododendron simsii
Sabra09G0020000 Salix brachista
Sabra16G0143300 Salix brachista
SalBow6G1167 Salvia bowleyana
Sc15g0002810 Simmondsia chinensis
Sed0015306 Sechium edule
Sed0022164 Sechium edule
SEGI_30768 Sequoiadendron giganteum
SEGI_36354 Sequoiadendron giganteum
SEGI_36434 Sequoiadendron giganteum
SGA_v2.0_scaffold104G30186 Striga asiatica
Solyc11g066130.1 Solanum lycopersicum
Sopen11g025890 Solanum pennellii
Sp4g11630 Schrenkiella parvula
TAR369G0554 Trochodendron aralioides
TAR623G0174 Trochodendron aralioides
THA.LOC104801521 Tarenaya hassleriana
Thecc.09G324600 Theobroma cacao
Thhalv10017135m.g Eutrema salsugineum
TPR.G14482 Trifolium pratense
TWI75G0532 Tripterygium wilfordii
TWI79G0822 Tripterygium wilfordii
unitig_37.g12852 Utricularia gibba
VMungo1127G0335 Vigna mungo
Zm00001eb015650 Zea mays
Zm00001eb039050 Zea mays
Zm00001eb239460 Zea mays
Zm00001eb293050 Zea mays
Zm00001eb413990 Zea mays

User provided reference genes

Program Settings