Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p37510 Brassica napus
A03p49940 Brassica napus
Aa31LG2G12660 Aethionema arabicum
Actinidia05202 Actinidia chinensis
Actinidia27463 Actinidia chinensis
Ah.12g056750 Amaranthus hybridus
AL7G38350 Arabidopsis lyrata
AL7G38400 Arabidopsis lyrata
Aqoxy6G01886 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AC5BZW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HK6I2L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LISY29 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MY6G43 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VT8LY8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y2DLV0 Arachis hypogaea
AT2G03010 Arabidopsis thaliana
AT4G16535 Arabidopsis thaliana
ATR0193G040 Amborella trichopoda
Atru.chr2.1841 Acer truncatum
AUR62007505 Chenopodium quinoa
AUR62039958 Chenopodium quinoa
BcaC01g01648 Brassica carinata
BcaC04g19403 Brassica carinata
BcaC06g33488 Brassica carinata
BcaNung02868 Brassica carinata
BolC7t45321H Brassica oleracea
BolC9t58475H Brassica oleracea
BraA03t14087Z Brassica rapa
BraA04t17310Z Brassica rapa
C03p59450 Brassica napus
C03p73400 Brassica napus
C07p47980 Brassica napus
C09p56080 Brassica napus
CANSAT21G1921 Cannabis sativa
CARHR222950 Cardamine hirsuta
Carub.0007s2494 Capsella rubella
Ca_21959_v3 Cicer arietinum L.
CBR_g29445 Chara braunii
Cc08_g12600 Coffea canephora
CDE02G4728 Ceratophyllum demersum
CDE11G0010 Ceratophyllum demersum
Cfa012739 Carpinus fangiana
Ciclev10005762m.g Citrus clementina
CiPaw.11G153200 Carya illinoinensis
ClCG01G004000 Citrullus lanatus
Cpa.g.sc29.144 Carica papaya
Cre06.g300200 Chlamydomonas reinhardtii
CsaV3_5G004180 Cucumis sativus L.
Dinv39131 Davidia involucrata
ECA232G3467 Erigeron canadensis
Eucgr.D02058 Eucalyptus grandis
Eucgr.D02068 Eucalyptus grandis
Eucgr.L01522 Eucalyptus grandis
FAN04G2180 Fragaria x ananassa
FAN08G0853 Fragaria x ananassa
FAN13G1623 Fragaria x ananassa
FAN18G0606 Fragaria x ananassa
FvH4_5g18710 Fragaria vesca
Glyma.17G140900 Glycine max
Gohir.A12G217700 Gossypium hirsutum
Gohir.D12G220200 Gossypium hirsutum
Gorai.008G235900 Gossypium raimondii
GSVIVG01001313001 Vitis vinifera
GSVIVG01030884001 Vitis vinifera
HanXRQChr02g0051581 Helianthus annuus
Haze_07889 Corylus avellana
Hma1.2p1_2380F.1_g320960 Hydrangea macrophylla
HPP92_014482 Vanilla planifolia
Lalb_Chr16g0389331 Lupinus albus
Lj1A353T9 Lonicera japonica
Lj4g0024258 Lotus japonicus
Lj8A452G56 Lonicera japonica
Lsat_1_v5_gn_3_521 Lactuca sativa
Manes.01G079600 Manihot esculenta
Manes.15G178400 Manihot esculenta
Manes.15G178500 Manihot esculenta
Mapoly0015s0012 Marchantia polymorpha
MD04G1088600 Malus domestica
Medtr4g101030 Medicago truncatula
MELO3C005537.2 Cucumis melo
Migut.A00968 Erythranthe guttata
MSTRG.12091 Avicennia marina
Nitab4.5_0000312g0170 Nicotiana tabacum
Nitab4.5_0008481g0010 Nicotiana tabacum
Nn1g01036 Nelumbo nucifera
Nn6g33981 Nelumbo nucifera
Oeu019590.1 Olea europaea
Oeu039628.1 Olea europaea
Os10g0507500 Oryza sativa ssp. japonica
Peaxi162Scf00002g00172 Petunia axillaris
PGR031G1557 Punica granatum
PGSC0003DMG401004755 Solanum tuberosum
Phvul.003G219800 Phaseolus vulgaris
Potri.001G123200 Populus trichocarpa
Pp3c3_19850 Physcomitrium patens
Prupe.5G071300 Prunus persica
Psat4g071640 Pisum sativum
PSO170G1975 Papaver somniferum
PSO528G0015 Papaver somniferum
QL12p012545 Quercus lobata
RcHm_v2.0_Chr7g0203001 Rosa chinensis
Rhsim07G0108000 Rhododendron simsii
Sabra01G0094900 Salix brachista
SalBow6G4398 Salvia bowleyana
Sc22g0000810 Simmondsia chinensis
Sed0012351 Sechium edule
Sed0026776 Sechium edule
SEGI_30297 Sequoiadendron giganteum
SGA_v2.0_scaffold120G32877 Striga asiatica
SHI10480 Sapria himalayana
Solyc08g078740.1 Solanum lycopersicum
Sopen08g027210 Solanum pennellii
Sp7g15110 Schrenkiella parvula
TAR375G0032 Trochodendron aralioides
Thecc.03G253200 Theobroma cacao
Thhalv10026056m.g Eutrema salsugineum
TPR.G37616 Trifolium pratense
TWI81G0148 Tripterygium wilfordii
unitig_0.g1067 Utricularia gibba
unitig_0.g1068 Utricularia gibba
unitig_61.g26196 Utricularia gibba
VMungo0251G3296 Vigna mungo
Zm00001eb044010 Zea mays

User provided reference genes

Program Settings