Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p68230 Brassica napus
Aa31LG1G8960 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3834 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5081 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5090 Anthoceros agrestis
Actinidia11018 Actinidia chinensis
Ah.01g004150 Amaranthus hybridus
Ah.01g004160 Amaranthus hybridus
AL1G13300 Arabidopsis lyrata
Aqoxy1G02377 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.84I3GY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y7U98Q Arachis hypogaea
AT1G03750 Arabidopsis thaliana
ATR0763G024 Amborella trichopoda
Atru.chr6.2900 Acer truncatum
AUR62037596 Chenopodium quinoa
AUR62037597 Chenopodium quinoa
BcaC07g42229 Brassica carinata
BolC8t52793H Brassica oleracea
BraA09t42158Z Brassica rapa
C08p52670 Brassica napus
CAN.G209.36 Capsicum annuum
CANSAT64G2467 Cannabis sativa
CARHR003080 Cardamine hirsuta
Carub.0001s0285 Capsella rubella
Ca_18940_v3 Cicer arietinum L.
CBR_g8167 Chara braunii
Cc05_g06560 Coffea canephora
Cc05_g07380 Coffea canephora
Cc05_g07400 Coffea canephora
Cc05_g07420 Coffea canephora
CDE06G2137 Ceratophyllum demersum
Cfa025753 Carpinus fangiana
Ciclev10003508m.g Citrus clementina
CiPaw.03G178600 Carya illinoinensis
ClCG02G017740 Citrullus lanatus
COL.COLO4_05945 Corchorus olitorius
Cpa.g.sc83.59 Carica papaya
Cpa.g.sc83.60 Carica papaya
Cre02.g143800 Chlamydomonas reinhardtii
CsaV3_6G012820 Cucumis sativus L.
CSS0045250 Camellia sinensis var. sinensis
DCAR_019177 Daucus carota
Dinv13396 Davidia involucrata
Duzib052G0408 Durio zibethinus
ECA232G1198 Erigeron canadensis
ECA238G1466 Erigeron canadensis
EL10Ac9g20791 Beta vulgaris
Eucgr.A01830 Eucalyptus grandis
FAN02G3238 Fragaria x ananassa
FAN05G3484 Fragaria x ananassa
FAN09G3634 Fragaria x ananassa
FAN09G3711 Fragaria x ananassa
FAN14G4359 Fragaria x ananassa
FvH4_6g26480 Fragaria vesca
Glyma.12G115800 Glycine max
Gohir.A12G138700 Gossypium hirsutum
Gohir.D12G143000 Gossypium hirsutum
Gorai.008G154400 Gossypium raimondii
GSVIVG01020568001 Vitis vinifera
HanXRQChr10g0284061 Helianthus annuus
Haze_13199 Corylus avellana
HPP92_010208 Vanilla planifolia
HPP92_010221 Vanilla planifolia
HPP92_010228 Vanilla planifolia
Hund01028 Selenicereus undatus
Lalb_Chr01g0005161 Lupinus albus
Lj3g0003116 Lotus japonicus
Lj8A109T81 Lonicera japonica
Lsat_1_v5_gn_4_66800 Lactuca sativa
Manes.13G144908 Manihot esculenta
Mapoly0042s0047 Marchantia polymorpha
MBI02_g25830_MAGBIO Magnolia biondii
MCO05G362 Micromonas commoda
MD17G1236900 Malus domestica
Medtr4g078460 Medicago truncatula
Medtr4g078495 Medicago truncatula
MELO3C013630.2 Cucumis melo
Migut.J00820 Erythranthe guttata
MSTRG.14347 Avicennia marina
Nitab4.5_0000638g0140 Nicotiana tabacum
Nitab4.5_0001752g0060 Nicotiana tabacum
Nn1g00010 Nelumbo nucifera
Nn1g00011 Nelumbo nucifera
Nn1g06495 Nelumbo nucifera
Oeu005602.1 Olea europaea
Os05g0247900 Oryza sativa ssp. japonica
Peaxi162Scf01415g00029 Petunia axillaris
PGR042G0545 Punica granatum
PGSC0003DMG400032815 Solanum tuberosum
Phvul.011G120000 Phaseolus vulgaris
Potri.017G012400 Populus trichocarpa
Pp3c12_25750 Physcomitrium patens
Prupe.3G139100 Prunus persica
Psat7g169040 Pisum sativum
QL08p039603 Quercus lobata
RcHm_v2.0_Chr2g0127761 Rosa chinensis
Rhsim06G0139600 Rhododendron simsii
RhsimUnG0145100 Rhododendron simsii
Sabra17G0010200 Salix brachista
SalBow1G0344 Salvia bowleyana
SalBow1G4063 Salvia bowleyana
Sc05g0003350 Simmondsia chinensis
Sed0011541 Sechium edule
SEGI_23197 Sequoiadendron giganteum
SEGI_23716 Sequoiadendron giganteum
SEGI_27288 Sequoiadendron giganteum
SGA_v2.0_scaffold109G31119 Striga asiatica
SHI10389 Sapria himalayana
SMO147G0241 Selaginella moellendorffii
Solyc07g053870.4 Solanum lycopersicum
Sopen07g027840 Solanum pennellii
Sp1g02610 Schrenkiella parvula
TAR626G0345 Trochodendron aralioides
THA.LOC104801170 Tarenaya hassleriana
Thecc.02G182200 Theobroma cacao
Thhalv10006771m.g Eutrema salsugineum
TPR.G29256 Trifolium pratense
TWI59G0128 Tripterygium wilfordii
unitig_62.g23165 Utricularia gibba
vmacro12325 Vaccinium macrocarpon
VMungo1127G2308 Vigna mungo
Zm00001eb220010 Zea mays

User provided reference genes

Program Settings