Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p09440 Brassica napus
Aa31LG3G7930 Aethionema arabicum
Actinidia03077 Actinidia chinensis
Actinidia31787 Actinidia chinensis
AL64U10030 Arabidopsis lyrata
AL8G25810 Arabidopsis lyrata
Aqoxy3G03161 Aquilegia oxysepala
Aqoxy3G03162 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.LW4644 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R2ZWGQ Arachis hypogaea
AT5G51510 Arabidopsis thaliana
ATR0049G082 Amborella trichopoda
Atru.chr1.683 Acer truncatum
Atru.chr12.858 Acer truncatum
AUR62002188 Chenopodium quinoa
AUR62015523 Chenopodium quinoa
BcaB08g35507 Brassica carinata
BcaC04g20665 Brassica carinata
BolC9t56962H Brassica oleracea
BraA10t43020Z Brassica rapa
C09p40820 Brassica napus
CAN.G1338.3 Capsicum annuum
CAN.G645.17 Capsicum annuum
CANSAT56G4273 Cannabis sativa
CARHR264290 Cardamine hirsuta
Carub.0008s1155 Capsella rubella
Ca_03612_v3 Cicer arietinum L.
Ca_10075_v3 Cicer arietinum L.
CBR_g39926 Chara braunii
Cc07_g16780 Coffea canephora
CDE02G0477 Ceratophyllum demersum
CDE11G0941 Ceratophyllum demersum
Cfa008204 Carpinus fangiana
Ciclev10006041m.g Citrus clementina
CiPaw.04G061000 Carya illinoinensis
CiPaw.05G217800 Carya illinoinensis
ClCG02G008790 Citrullus lanatus
Cre12.g534500 Chlamydomonas reinhardtii
CsaV3_3G016200 Cucumis sativus L.
CSS0006490 Camellia sinensis var. sinensis
CSS0007785 Camellia sinensis var. sinensis
DCAR_018100 Daucus carota
DCAR_028724 Daucus carota
Dinv22954 Davidia involucrata
Duzib213G0671 Durio zibethinus
Duzib213G1086 Durio zibethinus
ECA233G2919 Erigeron canadensis
ECA247G1821 Erigeron canadensis
EL10Ac3g05828 Beta vulgaris
Eucgr.A02884 Eucalyptus grandis
FAN07G1397 Fragaria x ananassa
FAN12G3923 Fragaria x ananassa
FAN17G1857 Fragaria x ananassa
FvH4_4g13180 Fragaria vesca
Glyma.09G257500 Glycine max
Glyma.18G235100 Glycine max
Gohir.A01G099000 Gossypium hirsutum
Gohir.D01G083500 Gossypium hirsutum
Gorai.002G109200 Gossypium raimondii
GSVIVG01018613001 Vitis vinifera
HanXRQChr13g0420601 Helianthus annuus
Haze_13851 Corylus avellana
Hma1.2p1_0146F.1_g065730 Hydrangea macrophylla
Hma1.2p1_0654F.1_g196670 Hydrangea macrophylla
HPP92_020994 Vanilla planifolia
HPP92_021027 Vanilla planifolia
Hund04605 Selenicereus undatus
Lalb_Chr19g0140371 Lupinus albus
Lj1g0017005 Lotus japonicus
Lj6g0019546 Lotus japonicus
Lsat_1_v5_gn_8_8920 Lactuca sativa
Manes.03G110816 Manihot esculenta
Manes.14G035000 Manihot esculenta
Mapoly0022s0103 Marchantia polymorpha
Mapoly0039s0020 Marchantia polymorpha
MD07G1255100 Malus domestica
Medtr3g075310 Medicago truncatula
MELO3C006818.2 Cucumis melo
Migut.O00298 Erythranthe guttata
MSTRG.8414 Avicennia marina
Nitab4.5_0001383g0120 Nicotiana tabacum
Nitab4.5_0001780g0030 Nicotiana tabacum
Nn6g34073 Nelumbo nucifera
Oeu014948.1 Olea europaea
Os10g0508600 Oryza sativa ssp. japonica
Peaxi162Scf00241g00526 Petunia axillaris
PGR042G2342 Punica granatum
PGSC0003DMG400023983 Solanum tuberosum
Phvul.011G177900 Phaseolus vulgaris
Potri.012G127100 Populus trichocarpa
Pp3c3_28350 Physcomitrium patens
Prupe.2G278900 Prunus persica
Prupe.2G279400 Prunus persica
Psat2g100400 Pisum sativum
Psat3g066720 Pisum sativum
PSO170G1682 Papaver somniferum
PSO782G1599 Papaver somniferum
QL09p018992 Quercus lobata
RcHm_v2.0_Chr4g0409771 Rosa chinensis
RcHm_v2.0_Chr4g0413311 Rosa chinensis
Rhsim09G0192300 Rhododendron simsii
Sabra12G0096300 Salix brachista
SalBow5G3546 Salvia bowleyana
SalBow5G4313 Salvia bowleyana
Sc19g0001980 Simmondsia chinensis
Sed0002492 Sechium edule
Sed0011118 Sechium edule
SGA_v2.0_scaffold10G05491 Striga asiatica
SHI13954 Sapria himalayana
Solyc11g006880.3 Solanum lycopersicum
Sopen11g002780 Solanum pennellii
Sp6g13670 Schrenkiella parvula
TAR125G0001 Trochodendron aralioides
TAR629G1779 Trochodendron aralioides
THA.LOC104811518 Tarenaya hassleriana
Thecc.07G184100 Theobroma cacao
Thhalv10014843m.g Eutrema salsugineum
TPR.G3657 Trifolium pratense
TWI23G1172 Tripterygium wilfordii
unitig_8.g3700 Utricularia gibba
vmacro09898 Vaccinium macrocarpon
VMungo1127G0460 Vigna mungo
Zm00001eb043910 Zea mays

User provided reference genes

Program Settings