Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG3G17730 Aethionema arabicum
Actinidia20026 Actinidia chinensis
Actinidia30262 Actinidia chinensis
Ah.06g190980 Amaranthus hybridus
AL6G19660 Arabidopsis lyrata
Aqoxy2G01154 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.96G0FW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BRZ89T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BUL9CE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YQI87S Arachis hypogaea
AT5G09270 Arabidopsis thaliana
ATR0824G232 Amborella trichopoda
Atru.chr1.2785 Acer truncatum
AUR62000510 Chenopodium quinoa
AUR62006855 Chenopodium quinoa
BcaB05g21561 Brassica carinata
BcaB08g37221 Brassica carinata
BcaC03g13247 Brassica carinata
BolC2t06340H Brassica oleracea
BraA02t04974Z Brassica rapa
BraA10t44844Z Brassica rapa
C02p03790 Brassica napus
C09p68050 Brassica napus
C09p68110 Brassica napus
C09p68150 Brassica napus
CAN.G1592.9 Capsicum annuum
CAN.G256.17 Capsicum annuum
CANSAT64G0511 Cannabis sativa
CANSAT78G0480 Cannabis sativa
CARHR204140 Cardamine hirsuta
Carub.0006s0782 Capsella rubella
Ca_10674_v3 Cicer arietinum L.
Ca_13203_v3 Cicer arietinum L.
Cc09_g10080 Coffea canephora
Cfa011174 Carpinus fangiana
Ciclev10003637m.g Citrus clementina
CiPaw.14G026200 Carya illinoinensis
ClCG02G000360 Citrullus lanatus
COL.COLO4_11288 Corchorus olitorius
COL.COLO4_13057 Corchorus olitorius
COL.COLO4_36340 Corchorus olitorius
Cpa.g.sc2692.1 Carica papaya
CsaV3_2G019480 Cucumis sativus L.
CSS0005410 Camellia sinensis var. sinensis
CSS0021017 Camellia sinensis var. sinensis
DCAR_026025 Daucus carota
Dinv44192 Davidia involucrata
Duzib177G0075 Durio zibethinus
EL10Ac4g09617 Beta vulgaris
Eucgr.I00130 Eucalyptus grandis
Eucgr.I00134 Eucalyptus grandis
Eucgr.I00143 Eucalyptus grandis
Eucgr.L03476 Eucalyptus grandis
FAN05G3461 Fragaria x ananassa
FAN09G2945 Fragaria x ananassa
FAN14G0828 Fragaria x ananassa
FvH4_6g45500 Fragaria vesca
Glyma.08G354200 Glycine max
Glyma.18G170600 Glycine max
Gohir.A05G286900 Gossypium hirsutum
Gohir.D05G287900 Gossypium hirsutum
Gorai.009G302900 Gossypium raimondii
GSVIVG01023542001 Vitis vinifera
HanXRQChr10g0308251 Helianthus annuus
Haze_02661 Corylus avellana
Haze_02674 Corylus avellana
Hma1.2p1_0847F.1_g227850 Hydrangea macrophylla
Hma1.2p1_4173F.1_g338420 Hydrangea macrophylla
HPP92_013811 Vanilla planifolia
Lalb_Chr01g0022321 Lupinus albus
Lj1g0019467 Lotus japonicus
Lsat_1_v5_gn_5_86080 Lactuca sativa
Manes.01G181300 Manihot esculenta
Mapoly0027s0076 Marchantia polymorpha
MBI06_g37673_MAGBIO Magnolia biondii
MBI06_g46723_MAGBIO Magnolia biondii
MD09G1082400 Malus domestica
MD10G1003300 Malus domestica
Medtr1g098510 Medicago truncatula
MELO3C023226.2 Cucumis melo
Migut.B01200 Erythranthe guttata
MSTRG.20541 Avicennia marina
Nitab4.5_0000644g0080 Nicotiana tabacum
Nitab4.5_0000829g0220 Nicotiana tabacum
Nitab4.5_0001688g0060 Nicotiana tabacum
Nitab4.5_0010800g0010 Nicotiana tabacum
Nn2g15145 Nelumbo nucifera
Oeu006489.1 Olea europaea
Os01g0861000 Oryza sativa ssp. japonica
Peaxi162Scf00033g00134 Petunia axillaris
Peaxi162Scf00386g00058 Petunia axillaris
PGR119G2211 Punica granatum
PGSC0003DMG400022672 Solanum tuberosum
PGSC0003DMG400030782 Solanum tuberosum
Phvul.008G125700 Phaseolus vulgaris
Potri.005G066900 Populus trichocarpa
Potri.007G102600 Populus trichocarpa
Pp3c8_7150 Physcomitrium patens
Prupe.3G241300 Prunus persica
Psat4g003200 Pisum sativum
Psat6g191840 Pisum sativum
QL10p041722 Quercus lobata
RcHm_v2.0_Chr2g0163441 Rosa chinensis
Rhsim10G0172600 Rhododendron simsii
Sabra05G0055000 Salix brachista
Sabra07G0084300 Salix brachista
Sc09g0002260 Simmondsia chinensis
Sed0009157 Sechium edule
SEGI_20234 Sequoiadendron giganteum
SHI36067 Sapria himalayana
Solyc06g054590.3 Solanum lycopersicum
Sopen01g029410 Solanum pennellii
Sopen06g019660 Solanum pennellii
Sp6g34040 Schrenkiella parvula
TAR369G0312 Trochodendron aralioides
TAR623G0329 Trochodendron aralioides
THA.LOC104818424 Tarenaya hassleriana
Thecc.08G189700 Theobroma cacao
Thhalv10015068m.g Eutrema salsugineum
TPR.G17035 Trifolium pratense
TWI79G1313 Tripterygium wilfordii
vmacro12040 Vaccinium macrocarpon
vmacro13565 Vaccinium macrocarpon
VMungo1383G1366 Vigna mungo

User provided reference genes

Program Settings