Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p30460 Brassica napus
Aa31LG8G5970 Aethionema arabicum
Ah.11g047950 Amaranthus hybridus
AL3G32550 Arabidopsis lyrata
Aqoxy3G04303 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.60FNUJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RQR8UB Arachis hypogaea
AT3G19180 Arabidopsis thaliana
ATR0618G229 Amborella trichopoda
Atru.chr9.92 Acer truncatum
Atru.chr9.93 Acer truncatum
Atru.chr9.94 Acer truncatum
AUR62008507 Chenopodium quinoa
AUR62021583 Chenopodium quinoa
BcaB06g25974 Brassica carinata
BolC5t33333H Brassica oleracea
BraA05t21885Z Brassica rapa
C05p46060 Brassica napus
CAN.G929.22 Capsicum annuum
CANSAT64G0368 Cannabis sativa
CARHR094580 Cardamine hirsuta
Carub.0003s1900 Capsella rubella
Ca_11834_v3 Cicer arietinum L.
Cc04_g08460 Coffea canephora
CDE04G2352 Ceratophyllum demersum
CDE07G0075 Ceratophyllum demersum
Cfa021434 Carpinus fangiana
Ciclev10018888m.g Citrus clementina
CiPaw.16G073000 Carya illinoinensis
ClCG08G001990 Citrullus lanatus
COL.COLO4_24905 Corchorus olitorius
Cpa.g.c41191 Carica papaya
Cpa.g.sc168.18 Carica papaya
CsaV3_6G002460 Cucumis sativus L.
CSS0020955 Camellia sinensis var. sinensis
CSS0021616 Camellia sinensis var. sinensis
CSS0047515 Camellia sinensis var. sinensis
DCAR_023244 Daucus carota
Dinv09728 Davidia involucrata
Duzib128G1857 Durio zibethinus
Duzib268G1227 Durio zibethinus
ECA232G1526 Erigeron canadensis
EL10Ac5g11111 Beta vulgaris
Eucgr.H00644 Eucalyptus grandis
FAN04G2680 Fragaria x ananassa
FAN08G1981 Fragaria x ananassa
FAN13G2897 Fragaria x ananassa
FAN18G1706 Fragaria x ananassa
FvH4_5g18390 Fragaria vesca
Glyma.09G164700 Glycine max
Glyma.16G213100 Glycine max
Gohir.A11G304500 Gossypium hirsutum
Gohir.D11G319900 Gossypium hirsutum
Gorai.007G350000 Gossypium raimondii
GSVIVG01029333001 Vitis vinifera
HanXRQChr16g0503331 Helianthus annuus
Haze_18329 Corylus avellana
Hma1.2p1_0493F.1_g164870 Hydrangea macrophylla
Hma1.2p1_0493F.1_g164880 Hydrangea macrophylla
HPP92_022060 Vanilla planifolia
Hund02599 Selenicereus undatus
Hund09878 Selenicereus undatus
Lalb_Chr14g0370231 Lupinus albus
Lalb_Chr22g0353981 Lupinus albus
Lalb_Chr24g0398561 Lupinus albus
Lalb_Chr24g0398581 Lupinus albus
Lj2g0027511 Lotus japonicus
Lj9A413T50 Lonicera japonica
Lsat_1_v5_gn_0_10501 Lactuca sativa
Manes.02G218300 Manihot esculenta
MBI06_g32742_MAGBIO Magnolia biondii
MD06G1239700 Malus domestica
MD14G1245800 Malus domestica
Medtr6g077830 Medicago truncatula
MELO3C025039.2 Cucumis melo
Migut.O00266 Erythranthe guttata
MSTRG.23211 Avicennia marina
Nitab4.5_0000782g0080 Nicotiana tabacum
Nitab4.5_0003040g0110 Nicotiana tabacum
Nn3g16143 Nelumbo nucifera
Nn4g26692 Nelumbo nucifera
Oeu038398.1 Olea europaea
Os04g0675800 Oryza sativa ssp. japonica
Peaxi162Scf00171g00246 Petunia axillaris
PGR083G0482 Punica granatum
PGSC0003DMG400010151 Solanum tuberosum
Phvul.004G139200 Phaseolus vulgaris
Potri.012G035900 Populus trichocarpa
Potri.012G036100 Populus trichocarpa
Potri.015G028101 Populus trichocarpa
Prupe.4G244800 Prunus persica
Prupe.5G243600 Prunus persica
Psat1g121960 Pisum sativum
PSO063G1521 Papaver somniferum
PSO782G2505 Papaver somniferum
QL10p034062 Quercus lobata
RcHm_v2.0_Chr7g0177091 Rosa chinensis
Rhsim08G0124900 Rhododendron simsii
Sabra12G0024600 Salix brachista
Sabra15G0023200 Salix brachista
SalBow5G3030 Salvia bowleyana
Sc04g0004520 Simmondsia chinensis
Sc04g0004530 Simmondsia chinensis
Sc04g0004660 Simmondsia chinensis
Sed0006637 Sechium edule
SEGI_09403 Sequoiadendron giganteum
SEGI_16116 Sequoiadendron giganteum
SGA_v2.0_scaffold90G27748 Striga asiatica
Solyc03g098610.3 Solanum lycopersicum
Sopen03g029320 Solanum pennellii
Sp3g17250 Schrenkiella parvula
TAR371G0897 Trochodendron aralioides
TAR629G0163 Trochodendron aralioides
TAR629G3132 Trochodendron aralioides
TAR629G3152 Trochodendron aralioides
THA.LOC104818545 Tarenaya hassleriana
Thecc.05G197300 Theobroma cacao
Thhalv10020089m.g Eutrema salsugineum
TPR.G19890 Trifolium pratense
TWI15G0476 Tripterygium wilfordii
unitig_26.g10113 Utricularia gibba
vmacro17745 Vaccinium macrocarpon
VMungo0464G1225 Vigna mungo
Zm00001eb066330 Zea mays

User provided reference genes

Program Settings