Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p03560 Brassica napus
A07p23080 Brassica napus
A09p49630 Brassica napus
Aa31LG10G11650 Aethionema arabicum
Actinidia37860 Actinidia chinensis
Ah.13g077440 Amaranthus hybridus
AL5G38190 Arabidopsis lyrata
Aqoxy3G03841 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2JVN0K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3W78Z9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.48UEJW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8931ZB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8XR3F9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B2YDCU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EU10QV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NYTL45 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S7MPKE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W45WAC Arachis hypogaea
AT3G56810 Arabidopsis thaliana
ATR1096G118 Amborella trichopoda
Atru.chr8.918 Acer truncatum
AUR62020980 Chenopodium quinoa
BcaB02g07636 Brassica carinata
BcaB02g08346 Brassica carinata
BcaC02g09872 Brassica carinata
BcaC07g39991 Brassica carinata
BcaC07g40118 Brassica carinata
BcaC08g44807 Brassica carinata
BolC4t25234H Brassica oleracea
BolC6t37547H Brassica oleracea
BolC8t50822H Brassica oleracea
BraA04t16080Z Brassica rapa
BraA07t29970Z Brassica rapa
BraA09t40416Z Brassica rapa
C04p35700 Brassica napus
C06p23780 Brassica napus
C08p32040 Brassica napus
CANSAT01G1982 Cannabis sativa
CARHR166960 Cardamine hirsuta
Carub.0005s2354 Capsella rubella
Ca_08329_v3 Cicer arietinum L.
Cc06_g20370 Coffea canephora
CDE02G4005 Ceratophyllum demersum
CDE04G0047 Ceratophyllum demersum
Cfa010473 Carpinus fangiana
Cfa019904 Carpinus fangiana
Ciclev10012153m.g Citrus clementina
CiPaw.09G161700 Carya illinoinensis
ClCG04G005020 Citrullus lanatus
ClCG10G016970 Citrullus lanatus
COL.COLO4_22773 Corchorus olitorius
Cpa.g.sc33.176 Carica papaya
CsaV3_3G039420 Cucumis sativus L.
CsaV3_4G028970 Cucumis sativus L.
CSS0027019 Camellia sinensis var. sinensis
DCAR_020622 Daucus carota
Dinv02787 Davidia involucrata
Dinv21555 Davidia involucrata
Duzib128G0300 Durio zibethinus
EL10Ac3g07362 Beta vulgaris
Eucgr.K01702 Eucalyptus grandis
FvH4_1g29470 Fragaria vesca
Glyma.03G003800 Glycine max
Glyma.19G122200 Glycine max
GSVIVG01025830001 Vitis vinifera
Haze_20347 Corylus avellana
HPP92_012452 Vanilla planifolia
HPP92_014333 Vanilla planifolia
HPP92_014340 Vanilla planifolia
Hund19052 Selenicereus undatus
Lalb_Chr14g0365211 Lupinus albus
Lalb_Chr22g0358161 Lupinus albus
Lalb_Chr22g0358171 Lupinus albus
Lj1A1064T35 Lonicera japonica
Lj1g0016001 Lotus japonicus
Manes.08G067300 Manihot esculenta
MBI13_g08646_MAGBIO Magnolia biondii
MBI13_g08647_MAGBIO Magnolia biondii
MBI13_g29622_MAGBIO Magnolia biondii
MBI13_g31583_MAGBIO Magnolia biondii
MD12G1111200 Malus domestica
Medtr7g087970 Medicago truncatula
MELO3C019169.2 Cucumis melo
MELO3C030720.2 Cucumis melo
Migut.J01575 Erythranthe guttata
MSTRG.6277 Avicennia marina
Nitab4.5_0002201g0030 Nicotiana tabacum
Oeu041986.1 Olea europaea
Oeu060747.1 Olea europaea
Os03g0319200 Oryza sativa ssp. japonica
PGR142G2092 Punica granatum
PGSC0003DMG400029088 Solanum tuberosum
Phvul.001G101500 Phaseolus vulgaris
Potri.006G026600 Populus trichocarpa
Potri.016G024600 Populus trichocarpa
Prupe.7G023900 Prunus persica
Psat0s3111g0200 Pisum sativum
PSO339G5815 Papaver somniferum
PSO384G0308 Papaver somniferum
QL07p015392 Quercus lobata
RcHm_v2.0_Chr3g0495051 Rosa chinensis
RhsimUnG0021200 Rhododendron simsii
Sabra06G0019700 Salix brachista
Sabra16G0030500 Salix brachista
SalBow6G3030 Salvia bowleyana
SalBow6G3731 Salvia bowleyana
Sc13g0000730 Simmondsia chinensis
Sed0012185 Sechium edule
Sed0023543 Sechium edule
SGA_v2.0_scaffold66G22329 Striga asiatica
Solyc08g067000.3 Solanum lycopersicum
Sopen08g020950 Solanum pennellii
Sp5g05780 Schrenkiella parvula
TAR623G0652 Trochodendron aralioides
THA.LOC104803305 Tarenaya hassleriana
Thecc.05G130400 Theobroma cacao
Thhalv10006250m.g Eutrema salsugineum
Thhalv10006450m.g Eutrema salsugineum
TPR.G23684 Trifolium pratense
TWI77G1010 Tripterygium wilfordii
unitig_744.g24157 Utricularia gibba
vmacro07594 Vaccinium macrocarpon
VMungo1383G2866 Vigna mungo
Zm00001eb015190 Zea mays

User provided reference genes

Program Settings