Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p26290 Brassica napus
A04p21670 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_228.2950 Anthoceros agrestis
Actinidia16521 Actinidia chinensis
Ah.06g191080 Amaranthus hybridus
AL4G23100 Arabidopsis lyrata
Aqoxy6G00315 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4SM61H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7TU5G5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.949H7S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B4AV5R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DSS8KU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E0QW5U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GQG991 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I50TU7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P5PFFU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PNID9I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q7YENP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RE08FE Arachis hypogaea
AT2G28605 Arabidopsis thaliana
ATR0584G200 Amborella trichopoda
Atru.chr4.1000 Acer truncatum
AUR62000524 Chenopodium quinoa
AUR62006869 Chenopodium quinoa
BcaB01g03112 Brassica carinata
BcaB06g28232 Brassica carinata
BcaC01g04984 Brassica carinata
BcaC02g08157 Brassica carinata
BolC3t15489H Brassica oleracea
BolC4t27297H Brassica oleracea
BraA03t11843Z Brassica rapa
BraA04t17731Z Brassica rapa
C03p31420 Brassica napus
C04p57790 Brassica napus
CAN.G186.2 Capsicum annuum
CANSAT01G1475 Cannabis sativa
CARHR121630 Cardamine hirsuta
Carub.0004s0957 Capsella rubella
CBR_g49982 Chara braunii
Cc02_g33910 Coffea canephora
CDE08G0565 Ceratophyllum demersum
CDE08G0611 Ceratophyllum demersum
Ciclev10002322m.g Citrus clementina
CiPaw.04G079200 Carya illinoinensis
COL.COLO4_35821 Corchorus olitorius
Cpa.g.sc37.12 Carica papaya
Cre16.g678851 Chlamydomonas reinhardtii
CsaV3_2G019570 Cucumis sativus L.
CSS0021790 Camellia sinensis var. sinensis
DCAR_009594 Daucus carota
Dinv05221 Davidia involucrata
Duzib187G0662 Durio zibethinus
EL10Ac4g09632 Beta vulgaris
Eucgr.H02106 Eucalyptus grandis
Eucgr.H05122 Eucalyptus grandis
FAN19G2853 Fragaria x ananassa
FAN23G0464 Fragaria x ananassa
FAN23G2801 Fragaria x ananassa
FAN28G2219 Fragaria x ananassa
FvH4_1g24980 Fragaria vesca
Glyma.04G209900 Glycine max
Glyma.06G156100 Glycine max
Gohir.A10G068160 Gossypium hirsutum
Gohir.D10G108000 Gossypium hirsutum
Gorai.011G118400 Gossypium raimondii
GSVIVG01022331001 Vitis vinifera
HanXRQChr12g0378071 Helianthus annuus
Hma1.2p1_0236F.1_g099250 Hydrangea macrophylla
HPP92_009279 Vanilla planifolia
Hund07232 Selenicereus undatus
Lalb_Chr08g0238171 Lupinus albus
Lj1g0009956 Lotus japonicus
Lj7A582T32 Lonicera japonica
Lsat_1_v5_gn_5_34560 Lactuca sativa
Manes.12G147800 Manihot esculenta
Manes.12G159300 Manihot esculenta
Mapoly0092s0018 Marchantia polymorpha
MBI06_g35206_MAGBIO Magnolia biondii
MBI11_g02539_MAGBIO Magnolia biondii
MBI17_g01556_MAGBIO Magnolia biondii
MCO01G211 Micromonas commoda
MD01G1000300 Malus domestica
Medtr3g096750 Medicago truncatula
MELO3C023216.2 Cucumis melo
Migut.H00824 Erythranthe guttata
MSTRG.23490 Avicennia marina
Nitab4.5_0004105g0090 Nicotiana tabacum
Nitab4.5_0013462g0010 Nicotiana tabacum
Nn1g08971 Nelumbo nucifera
Oeu011026.1 Olea europaea
Os04g0434900 Oryza sativa ssp. japonica
Peaxi162Scf00842g00214 Petunia axillaris
PGR102G0633 Punica granatum
PGSC0003DMG400032538 Solanum tuberosum
Phvul.009G154200 Phaseolus vulgaris
Potri.005G068500 Populus trichocarpa
Potri.007G100800 Populus trichocarpa
Pp3c8_18060 Physcomitrium patens
PRCOL_00004434 Prasinoderma coloniale
Prupe.4G276300 Prunus persica
Psat5g060360 Pisum sativum
PSO782G1065 Papaver somniferum
QL10p041175 Quercus lobata
QL10p041464 Quercus lobata
RcHm_v2.0_Chr2g0122611 Rosa chinensis
Rhsim01G0141500 Rhododendron simsii
SalBow1G4836 Salvia bowleyana
Sc02g0003550 Simmondsia chinensis
SEGI_06099 Sequoiadendron giganteum
SEGI_37383 Sequoiadendron giganteum
SGA_v2.0_scaffold273G46467 Striga asiatica
SMO117G0258 Selaginella moellendorffii
Solyc04g009420.3 Solanum lycopersicum
Sopen04g004550 Solanum pennellii
Sp4g11430 Schrenkiella parvula
TAR628G0979 Trochodendron aralioides
THA.LOC104826346 Tarenaya hassleriana
Thecc.01G138200 Theobroma cacao
Thhalv10017176m.g Eutrema salsugineum
TPR.G10777 Trifolium pratense
TWI31G0926 Tripterygium wilfordii
unitig_899.g15151 Utricularia gibba
vmacro18688 Vaccinium macrocarpon
VMungo0464G0362 Vigna mungo
Zm00001eb422700 Zea mays

User provided reference genes

Program Settings