Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p29740 Brassica napus
A09p60070 Brassica napus
Aa31LG4G3960 Aethionema arabicum
Aa31LG7G2900 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1432 Anthoceros agrestis
Actinidia18902 Actinidia chinensis
Actinidia35123 Actinidia chinensis
Ah.11g043570 Amaranthus hybridus
AL1G30540 Arabidopsis lyrata
AL2G33440 Arabidopsis lyrata
Aqoxy3G04019 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FT2DSH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LZ1976 Arachis hypogaea
AT1G18170 Arabidopsis thaliana
AT1G73655 Arabidopsis thaliana
ATR1102G034 Amborella trichopoda
Atru.chr9.1750 Acer truncatum
AUR62041524 Chenopodium quinoa
AUR62042074 Chenopodium quinoa
AUR62043302 Chenopodium quinoa
BcaB03g15721 Brassica carinata
BcaB05g24090 Brassica carinata
BcaC07g41342 Brassica carinata
BcaC08g45629 Brassica carinata
BolC6t38505H Brassica oleracea
BolC8t51897H Brassica oleracea
BraA07t30613Z Brassica rapa
BraA09t41376Z Brassica rapa
C06p33920 Brassica napus
C08p43510 Brassica napus
CAN.G1129.15 Capsicum annuum
CARHR018740 Cardamine hirsuta
CARHR066720 Cardamine hirsuta
Carub.0001s1781 Capsella rubella
Carub.0002s2040 Capsella rubella
Ca_17203_v3 Cicer arietinum L.
Cc04_g06390 Coffea canephora
CDE06G1309 Ceratophyllum demersum
Cfa019678 Carpinus fangiana
Ciclev10009243m.g Citrus clementina
CiPaw.15G140700 Carya illinoinensis
ClCG04G010700 Citrullus lanatus
COL.COLO4_16137 Corchorus olitorius
Cpa.g.sc3.410 Carica papaya
Cre02.g095097 Chlamydomonas reinhardtii
CsaV3_1G007080 Cucumis sativus L.
CSS0009173 Camellia sinensis var. sinensis
CSS0029176 Camellia sinensis var. sinensis
DCAR_014010 Daucus carota
Dinv18255 Davidia involucrata
Duzib068G1027 Durio zibethinus
Duzib084G0786 Durio zibethinus
ECA233G1701 Erigeron canadensis
Eucgr.K02266 Eucalyptus grandis
FAN04G0820 Fragaria x ananassa
FAN08G1083 Fragaria x ananassa
FAN18G0499 Fragaria x ananassa
Glyma.05G245200 Glycine max
Glyma.08G052800 Glycine max
Gohir.A08G174100 Gossypium hirsutum
Gohir.D08G192800 Gossypium hirsutum
Gorai.004G202900 Gossypium raimondii
GSVIVG01008414001 Vitis vinifera
HanXRQChr08g0227401 Helianthus annuus
Haze_18811 Corylus avellana
Hma1.2p1_0669F.1_g200190 Hydrangea macrophylla
Hund02327 Selenicereus undatus
Lalb_Chr16g0387101 Lupinus albus
Lj4g0021104 Lotus japonicus
Lj5A155T99 Lonicera japonica
Lj5A156T88 Lonicera japonica
Lsat_1_v5_gn_8_144020 Lactuca sativa
Manes.14G170200 Manihot esculenta
Mapoly0139s0002 Marchantia polymorpha
MBI12_g30399_MAGBIO Magnolia biondii
MCO02G248 Micromonas commoda
MCO04G385 Micromonas commoda
MD06G1230600 Malus domestica
MD14G1235200 Malus domestica
Medtr8g107010 Medicago truncatula
MELO3C002126.2 Cucumis melo
Migut.I00447 Erythranthe guttata
MSTRG.4570 Avicennia marina
Nitab4.5_0008639g0010 Nicotiana tabacum
Nn4g24192 Nelumbo nucifera
Oeu026288.1 Olea europaea
Os03g0708500 Oryza sativa ssp. japonica
Peaxi162Scf00683g00146 Petunia axillaris
PGR044G0876 Punica granatum
PGSC0003DMG400005734 Solanum tuberosum
Phvul.002G328804 Phaseolus vulgaris
Potri.012G048300 Populus trichocarpa
Pp3c16_12630 Physcomitrium patens
PRCOL_00004958 Prasinoderma coloniale
PRCOL_00004995 Prasinoderma coloniale
Prupe.5G231900 Prunus persica
Psat7g002000 Pisum sativum
PSO017G1288 Papaver somniferum
PSO478G4576 Papaver somniferum
QL10p028192 Quercus lobata
QL10p028307 Quercus lobata
RcHm_v2.0_Chr7g0178601 Rosa chinensis
Rhsim12G0139100 Rhododendron simsii
Sabra12G0033800 Salix brachista
Sed0027930 Sechium edule
SGA_v2.0_scaffold313G48304 Striga asiatica
SMO200G0018 Selaginella moellendorffii
Solyc03g119150.4 Solanum lycopersicum
Sopen03g038040 Solanum pennellii
Sp5g28830 Schrenkiella parvula
TAR371G0894 Trochodendron aralioides
TAR629G2659 Trochodendron aralioides
TAR629G2851 Trochodendron aralioides
THA.LOC104812166 Tarenaya hassleriana
THA.LOC104813923 Tarenaya hassleriana
Thecc.03G053300 Theobroma cacao
Thhalv10008547m.g Eutrema salsugineum
Thhalv10019056m.g Eutrema salsugineum
TPR.G1413 Trifolium pratense
TWI60G0269 Tripterygium wilfordii
vmacro16417 Vaccinium macrocarpon
VMungo0251G3760 Vigna mungo
Zm00001eb216540 Zea mays
Zm00001eb235380 Zea mays
Zm00001eb235390 Zea mays

User provided reference genes

Program Settings