Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p17950 Brassica napus
A05p35020 Brassica napus
Aa31LG10G1560 Aethionema arabicum
Aa31LG8G1630 Aethionema arabicum
Actinidia12330 Actinidia chinensis
Actinidia20596 Actinidia chinensis
Ah.06g187410 Amaranthus hybridus
AL1G62390 Arabidopsis lyrata
AL3G26710 Arabidopsis lyrata
Aqoxy6G00854 Aquilegia oxysepala
AT1G53700 Arabidopsis thaliana
AT3G14370 Arabidopsis thaliana
ATR0767G262 Amborella trichopoda
Atru.chr2.1831 Acer truncatum
AUR62013960 Chenopodium quinoa
AUR62019653 Chenopodium quinoa
BcaB02g10895 Brassica carinata
BcaB06g25391 Brassica carinata
BcaC05g29089 Brassica carinata
BcaC08g44098 Brassica carinata
BolC5t33974H Brassica oleracea
BolC6t36698H Brassica oleracea
BraA05t20688Z Brassica rapa
BraA05t22316Z Brassica rapa
C05p52970 Brassica napus
C06p15230 Brassica napus
CAN.G1003.31 Capsicum annuum
CANSAT56G2466 Cannabis sativa
CANSAT56G3482 Cannabis sativa
CARHR044000 Cardamine hirsuta
CARHR089410 Cardamine hirsuta
Carub.0001s4297 Capsella rubella
Carub.0003s1408 Capsella rubella
Ca_03482_v3 Cicer arietinum L.
Cc05_g10050 Coffea canephora
Cfa021487 Carpinus fangiana
Ciclev10019874m.g Citrus clementina
CiPaw.12G006200 Carya illinoinensis
ClCG07G010620 Citrullus lanatus
COL.COLO4_07050 Corchorus olitorius
Cpa.g.sc229.7 Carica papaya
CsaV3_4G007680 Cucumis sativus L.
CSS0005742 Camellia sinensis var. sinensis
DCAR_021063 Daucus carota
Dinv21349 Davidia involucrata
Duzib213G1059 Durio zibethinus
ECA234G3711 Erigeron canadensis
ECA236G2550 Erigeron canadensis
EL10Ac4g08524 Beta vulgaris
Eucgr.F03194 Eucalyptus grandis
FAN11G1324 Fragaria x ananassa
FAN16G0981 Fragaria x ananassa
FAN21G2829 Fragaria x ananassa
FAN25G3706 Fragaria x ananassa
FvH4_3g16190 Fragaria vesca
Glyma.08G174400 Glycine max
Glyma.15G252700 Glycine max
Gohir.A01G036800 Gossypium hirsutum
Gohir.A05G328700 Gossypium hirsutum
Gohir.D01G024100 Gossypium hirsutum
Gohir.D05G329700 Gossypium hirsutum
Gorai.002G032600 Gossypium raimondii
Gorai.009G353100 Gossypium raimondii
GSVIVG01020511001 Vitis vinifera
HanXRQChr10g0307441 Helianthus annuus
HanXRQChr11g0329991 Helianthus annuus
Haze_08511 Corylus avellana
HPP92_022285 Vanilla planifolia
Lalb_Chr25g0285261 Lupinus albus
Lj1C805G8 Lonicera japonica
Lj3g0008587 Lotus japonicus
Lj8P140T32 Lonicera japonica
Lsat_1_v5_gn_5_121181 Lactuca sativa
Lsat_1_v5_gn_7_99560 Lactuca sativa
MD05G1211600 Malus domestica
Medtr2g069990 Medicago truncatula
MELO3C016172.2 Cucumis melo
Migut.C00169 Erythranthe guttata
Migut.M00668 Erythranthe guttata
MSTRG.12853 Avicennia marina
Nitab4.5_0001612g0080 Nicotiana tabacum
Nn1g05593 Nelumbo nucifera
Nn4g26236 Nelumbo nucifera
Nn5g29863 Nelumbo nucifera
Oeu012711.1 Olea europaea
Os03g0253200 Oryza sativa ssp. japonica
Peaxi162Scf00111g00062 Petunia axillaris
PGR031G2679 Punica granatum
PGSC0003DMG400031090 Solanum tuberosum
Phvul.005G054400 Phaseolus vulgaris
Potri.001G435900 Populus trichocarpa
Potri.011G139800 Populus trichocarpa
Prupe.4G145600 Prunus persica
Psat1g009960 Pisum sativum
PSO541G0231 Papaver somniferum
PSO675G2024 Papaver somniferum
QL04p072761 Quercus lobata
QL04p072805 Quercus lobata
RcHm_v2.0_Chr5g0027261 Rosa chinensis
Rhsim06G0183800 Rhododendron simsii
Sabra11G0125900 Salix brachista
Sabra16G0290100 Salix brachista
Sabra16G0291200 Salix brachista
SalBow7G4785 Salvia bowleyana
Sc16g0003430 Simmondsia chinensis
Sed0014130 Sechium edule
SEGI_23773 Sequoiadendron giganteum
SGA_v2.0_scaffold4G02143 Striga asiatica
Solyc07g056400.1 Solanum lycopersicum
Sopen07g029770 Solanum pennellii
Sp1g40240 Schrenkiella parvula
Sp3g12660 Schrenkiella parvula
TAR381G1135 Trochodendron aralioides
THA.LOC104815590 Tarenaya hassleriana
THA.LOC104822765 Tarenaya hassleriana
Thecc.07G157800 Theobroma cacao
Thhalv10011428m.g Eutrema salsugineum
Thhalv10020629m.g Eutrema salsugineum
TPR.G24671 Trifolium pratense
TWI38G1876 Tripterygium wilfordii
unitig_62.g23078 Utricularia gibba
unitig_62.g23079 Utricularia gibba
vmacro12027 Vaccinium macrocarpon
VMungo1080G1300 Vigna mungo
Zm00001eb010910 Zea mays

User provided reference genes

Program Settings