Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p17900 Brassica napus
Aa31LG4G7650 Aethionema arabicum
Aa31LG4G7660 Aethionema arabicum
Aa31LG7G5770 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.972 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.993 Anthoceros agrestis
Actinidia03468 Actinidia chinensis
Actinidia29467 Actinidia chinensis
AL1G34990 Arabidopsis lyrata
Aqoxy5G02345 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea
AT1G21790 Arabidopsis thaliana
ATR0584G160 Amborella trichopoda
Atru.chr13.1464 Acer truncatum
Atru.chr13.1486 Acer truncatum
AUR62014332 Chenopodium quinoa
AUR62019075 Chenopodium quinoa
BcaB07g32178 Brassica carinata
BcaC05g26102 Brassica carinata
BolC5t30779H Brassica oleracea
BraA06t24880Z Brassica rapa
C05p20800 Brassica napus
CAN.G69.14 Capsicum annuum
CANSAT35G0359 Cannabis sativa
CANSAT35G1811 Cannabis sativa
CARHR022170 Cardamine hirsuta
Carub.0001s2125 Capsella rubella
Carub.0005s2346 Capsella rubella
Ca_16559_v3 Cicer arietinum L.
CBR_g40088 Chara braunii
Cc10_g11940 Coffea canephora
CDE06G0548 Ceratophyllum demersum
CDE08G0135 Ceratophyllum demersum
Cfa016021 Carpinus fangiana
Ciclev10001495m.g Citrus clementina
CiPaw.06G031300 Carya illinoinensis
ClCG08G005670 Citrullus lanatus
COL.COLO4_20860 Corchorus olitorius
Cpa.g.sc64.93 Carica papaya
CsaV3_6G034460 Cucumis sativus L.
CSS0023480 Camellia sinensis var. sinensis
CSS0048522 Camellia sinensis var. sinensis
DCAR_003552 Daucus carota
Dinv27309 Davidia involucrata
Duzib093G0047 Durio zibethinus
ECA232G1829 Erigeron canadensis
EL10Ac1g01019 Beta vulgaris
Eucgr.F04350 Eucalyptus grandis
FAN15G0029 Fragaria x ananassa
FAN20G1317 Fragaria x ananassa
FAN24G2914 Fragaria x ananassa
FvH4_2g26990 Fragaria vesca
Glyma.04G249500 Glycine max
Glyma.06G113400 Glycine max
Gohir.A05G268900 Gossypium hirsutum
Gohir.D05G270800 Gossypium hirsutum
Gorai.009G283400 Gossypium raimondii
GSVIVG01008863001 Vitis vinifera
HanXRQChr09g0260611 Helianthus annuus
Haze_00437 Corylus avellana
HPP92_013753 Vanilla planifolia
HPP92_013761 Vanilla planifolia
Hund26807 Selenicereus undatus
Lalb_Chr11g0065931 Lupinus albus
Lj1g0017707 Lotus japonicus
Lj7C341T13 Lonicera japonica
Lj7C341T14 Lonicera japonica
Lsat_1_v5_gn_4_135580 Lactuca sativa
Manes.02G163600 Manihot esculenta
Manes.18G077500 Manihot esculenta
Mapoly0055s0084 Marchantia polymorpha
MD08G1162300 Malus domestica
MD15G1347700 Malus domestica
Medtr3g088060 Medicago truncatula
MELO3C010612.2 Cucumis melo
Migut.N03281 Erythranthe guttata
MSTRG.24172 Avicennia marina
Nitab4.5_0000630g0130 Nicotiana tabacum
Nitab4.5_0000968g0040 Nicotiana tabacum
Nn5g28301 Nelumbo nucifera
Oeu024776.1 Olea europaea
Oeu029946.1 Olea europaea
Oeu040412.1 Olea europaea
Oeu040413.1 Olea europaea
Oeu063471.1 Olea europaea
Oeu063701.1 Olea europaea
Os01g0869600 Oryza sativa ssp. japonica
Peaxi162Scf01270g00111 Petunia axillaris
PGR044G1562 Punica granatum
PGSC0003DMG400007898 Solanum tuberosum
PGSC0003DMG400044436 Solanum tuberosum
PGSC0003DMG402008996 Solanum tuberosum
Phvul.009G125300 Phaseolus vulgaris
Potri.002G083300 Populus trichocarpa
Potri.005G178200 Populus trichocarpa
Pp3c12_11900 Physcomitrium patens
Prupe.1G495500 Prunus persica
Prupe.1G512700 Prunus persica
Psat5g087320 Pisum sativum
PSO017G0487 Papaver somniferum
PSO478G0228 Papaver somniferum
QL09p034510 Quercus lobata
RcHm_v2.0_Chr6g0295871 Rosa chinensis
RhsimUnG0092500 Rhododendron simsii
Sabra05G0134700 Salix brachista
Sc15g0002770 Simmondsia chinensis
Sed0026599 Sechium edule
SGA_v2.0_scaffold24G10458 Striga asiatica
SMO351G0129 Selaginella moellendorffii
Solyc01g079770.2 Solanum lycopersicum
Sopen01g031530 Solanum pennellii
Sp1g19350 Schrenkiella parvula
TAR628G0332 Trochodendron aralioides
THA.LOC104800197 Tarenaya hassleriana
Thecc.08G125800 Theobroma cacao
Thhalv10008385m.g Eutrema salsugineum
TPR.G21062 Trifolium pratense
TWI60G0608 Tripterygium wilfordii
unitig_748.g7104 Utricularia gibba
vmacro00835 Vaccinium macrocarpon
VMungo1309G2133 Vigna mungo
Zm00001eb146520 Zea mays
Zm00001eb366620 Zea mays

User provided reference genes

Program Settings