Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p36240 Brassica napus
A05p31590 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_344.2039 Anthoceros agrestis
Actinidia18911 Actinidia chinensis
Actinidia35109 Actinidia chinensis
Ah.11g045280 Amaranthus hybridus
AL3G31340 Arabidopsis lyrata
Aqoxy3G00431 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7LX2IS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A2QZNW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IWL1UH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X5TZ4V Arachis hypogaea
AT3G18165 Arabidopsis thaliana
ATR0068G069 Amborella trichopoda
Atru.chr9.948 Acer truncatum
AUR62029953 Chenopodium quinoa
AUR62029954 Chenopodium quinoa
AUR62033751 Chenopodium quinoa
BcaB04g20790 Brassica carinata
BcaC05g28661 Brassica carinata
BcaC09g48772 Brassica carinata
BolC1t04568H Brassica oleracea
BolC5t33212H Brassica oleracea
BolC5t33504H Brassica oleracea
BraA01t03699Z Brassica rapa
BraA05t21994Z Brassica rapa
C01p46070 Brassica napus
C05p44850 Brassica napus
C05p47920 Brassica napus
CAN.G1129.32 Capsicum annuum
CANSAT80G1708 Cannabis sativa
CANSAT80G2078 Cannabis sativa
CARHR093490 Cardamine hirsuta
Carub.0003s1789 Capsella rubella
Ca_14628_v3 Cicer arietinum L.
Ca_17308_v3 Cicer arietinum L.
Ca_29797_v3 Cicer arietinum L.
Cc04_g06640 Coffea canephora
CDE08G0043 Ceratophyllum demersum
Cfa019698 Carpinus fangiana
Ciclev10009263m.g Citrus clementina
CiPaw.15G139100 Carya illinoinensis
ClCG04G010780 Citrullus lanatus
COL.COLO4_07530 Corchorus olitorius
Cre17.g697350 Chlamydomonas reinhardtii
CsaV3_1G007020 Cucumis sativus L.
CSS0012934 Camellia sinensis var. sinensis
CSS0018698 Camellia sinensis var. sinensis
DCAR_011381 Daucus carota
Dinv13547 Davidia involucrata
Duzib160G0876 Durio zibethinus
ECA240G0871 Erigeron canadensis
EL10Ac5g11521 Beta vulgaris
Eucgr.B00853 Eucalyptus grandis
FAN08G0602 Fragaria x ananassa
FAN13G0553 Fragaria x ananassa
FAN18G2854 Fragaria x ananassa
FvH4_5g17030 Fragaria vesca
Glyma.05G243600 Glycine max
Glyma.08G051400 Glycine max
Gohir.A06G114800 Gossypium hirsutum
Gohir.D06G123100 Gossypium hirsutum
Gorai.010G143200 Gossypium raimondii
GSVIVG01008385001 Vitis vinifera
HanXRQChr03g0090991 Helianthus annuus
Hma1.2p1_1257F.1_g270850 Hydrangea macrophylla
Hma1.2p1_1257F.1_g270860 Hydrangea macrophylla
HPP92_018005 Vanilla planifolia
HPP92_026682 Vanilla planifolia
Hund02335 Selenicereus undatus
Lalb_Chr09g0330531 Lupinus albus
Lalb_Chr16g0387151 Lupinus albus
Lj4g0023570 Lotus japonicus
Lj9A422G65 Lonicera japonica
Lsat_1_v5_gn_3_114081 Lactuca sativa
Manes.14G168500 Manihot esculenta
Mapoly0110s0002 Marchantia polymorpha
MBI13_g00575_MAGBIO Magnolia biondii
MCO11G869 Micromonas commoda
MD00G1160500 Malus domestica
MD14G1233600 Malus domestica
Medtr8g106740 Medicago truncatula
MELO3C002120.2 Cucumis melo
Migut.L01913 Erythranthe guttata
MSTRG.22939 Avicennia marina
Nitab4.5_0000150g0080 Nicotiana tabacum
Nitab4.5_0001158g0030 Nicotiana tabacum
Nitab4.5_0012369g0010 Nicotiana tabacum
Nn2g14536 Nelumbo nucifera
Oeu014368.1 Olea europaea
Peaxi162Scf00683g10026 Petunia axillaris
PGR083G0394 Punica granatum
PGSC0003DMG400005659 Solanum tuberosum
Phvul.002G327300 Phaseolus vulgaris
Potri.015G041800 Populus trichocarpa
Pp3c9_17380 Physcomitrium patens
Prupe.5G229800 Prunus persica
Psat7g003920 Pisum sativum
Psat7g003960 Pisum sativum
PSO017G1461 Papaver somniferum
PSO478G0876 Papaver somniferum
QL10p027511 Quercus lobata
RcHm_v2.0_Chr7g0178821 Rosa chinensis
Rhsim12G0139900 Rhododendron simsii
Sabra15G0055300 Salix brachista
Sabra15G0061600 Salix brachista
SalBow5G1692 Salvia bowleyana
Sc10g0009340 Simmondsia chinensis
Sed0021446 Sechium edule
SEGI_33728 Sequoiadendron giganteum
SGA_v2.0_scaffold21G09613 Striga asiatica
SMO339G0064 Selaginella moellendorffii
Solyc03g119010.3 Solanum lycopersicum
Sopen00g010550 Solanum pennellii
Sp3g16280 Schrenkiella parvula
TAR622G1089 Trochodendron aralioides
THA.LOC104820370 Tarenaya hassleriana
Thecc.06G020700 Theobroma cacao
Thhalv10021375m.g Eutrema salsugineum
TPR.G12761 Trifolium pratense
TWI81G0293 Tripterygium wilfordii
unitig_27.g24963 Utricularia gibba
vmacro16426 Vaccinium macrocarpon
VMungo0251G3506 Vigna mungo
Zm00001eb128260 Zea mays

User provided reference genes

Program Settings