Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p27120 Brassica napus
Aa31LG4G1530 Aethionema arabicum
Aa31LG4G1550 Aethionema arabicum
Actinidia12756 Actinidia chinensis
Actinidia12757 Actinidia chinensis
Actinidia24662 Actinidia chinensis
Ah.16g106150 Amaranthus hybridus
AL2G40100 Arabidopsis lyrata
Aqoxy1G01398 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5BUI92 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HD0F2Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K4I1Z6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SHRD5B Arachis hypogaea
AT1G79490 Arabidopsis thaliana
ATR0763G028 Amborella trichopoda
Atru.chr4.442 Acer truncatum
AUR62037646 Chenopodium quinoa
AUR62041047 Chenopodium quinoa
BcaB02g07217 Brassica carinata
BcaC08g45352 Brassica carinata
BcaC08g45354 Brassica carinata
BolC6t38148H Brassica oleracea
BraA07t30357Z Brassica rapa
C06p29860 Brassica napus
CAN.G1856.7 Capsicum annuum
CARHR073150 Cardamine hirsuta
Carub.0002s2635 Capsella rubella
Ca_18242_v3 Cicer arietinum L.
Cc03_g09090 Coffea canephora
CDE04G3166 Ceratophyllum demersum
CDE07G1255 Ceratophyllum demersum
Cfa009889 Carpinus fangiana
Ciclev10004323m.g Citrus clementina
CiPaw.11G057900 Carya illinoinensis
ClCG11G008250 Citrullus lanatus
COL.COLO4_19419 Corchorus olitorius
Cpa.g.sc32.87 Carica papaya
CsaV3_2G033410 Cucumis sativus L.
CSS0002738 Camellia sinensis var. sinensis
CSS0045056 Camellia sinensis var. sinensis
CSS0048512 Camellia sinensis var. sinensis
DCAR_013714 Daucus carota
Dinv19578 Davidia involucrata
Duzib114G0960 Durio zibethinus
ECA236G4525 Erigeron canadensis
EL10Ac5g11604 Beta vulgaris
EL10Ac7g17377 Beta vulgaris
EL10Ac7g17578 Beta vulgaris
EL10Ac8g19618 Beta vulgaris
EL10As3g23370 Beta vulgaris
Eucgr.H04993 Eucalyptus grandis
FAN11G0790 Fragaria x ananassa
FAN16G1625 Fragaria x ananassa
FAN21G2631 Fragaria x ananassa
FAN25G3388 Fragaria x ananassa
FvH4_3g14450 Fragaria vesca
Glyma.05G072500 Glycine max
Glyma.19G055700 Glycine max
Gohir.A10G180000 Gossypium hirsutum
Gohir.D10G186900 Gossypium hirsutum
Gorai.011G209700 Gossypium raimondii
GSVIVG01020873001 Vitis vinifera
HanXRQChr10g0283251 Helianthus annuus
Haze_23251 Corylus avellana
Hma1.2p1_0151F.1_g067090 Hydrangea macrophylla
Hma1.2p1_0151F.1_g067100 Hydrangea macrophylla
HPP92_005952 Vanilla planifolia
Lalb_Chr07g0188381 Lupinus albus
Lj2C11T2 Lonicera japonica
Lj4g0005133 Lotus japonicus
Lsat_1_v5_gn_7_110921 Lactuca sativa
Manes.14G157747 Manihot esculenta
MBI02_g01129_MAGBIO Magnolia biondii
MD05G1236700 Malus domestica
MD10G1213500 Malus domestica
MD10G1213600 Malus domestica
Medtr4g094688 Medicago truncatula
Medtr6g004710 Medicago truncatula
MELO3C008113.2 Cucumis melo
Migut.M01509 Erythranthe guttata
MSTRG.16085 Avicennia marina
Nitab4.5_0020695g0010 Nicotiana tabacum
Nn2g12307 Nelumbo nucifera
Oeu033075.1 Olea europaea
Oeu046263.1 Olea europaea
Os04g0612800 Oryza sativa ssp. japonica
Peaxi162Scf00207g00514 Petunia axillaris
PGR031G1485 Punica granatum
PGSC0003DMG400026230 Solanum tuberosum
Phvul.004G057900 Phaseolus vulgaris
Potri.010G173400 Populus trichocarpa
Prupe.4G129400 Prunus persica
Psat7g088600 Pisum sativum
PSO541G0939 Papaver somniferum
PSO675G4723 Papaver somniferum
QL03p065678 Quercus lobata
QL04p093175 Quercus lobata
QL04p093513 Quercus lobata
QL93p0310_0071 Quercus lobata
RcHm_v2.0_Chr5g0023761 Rosa chinensis
Rhsim06G0243700 Rhododendron simsii
Sabra10G0133300 Salix brachista
SalBow8G2731 Salvia bowleyana
Sc19g0006030 Simmondsia chinensis
Sed0008800 Sechium edule
SEGI_37454 Sequoiadendron giganteum
SEGI_39627 Sequoiadendron giganteum
SGA_v2.0_scaffold7G03621 Striga asiatica
SHI18012 Sapria himalayana
SHI52114 Sapria himalayana
SMO196G0223 Selaginella moellendorffii
Solyc08g078150.1 Solanum lycopersicum
Sopen08g026650 Solanum pennellii
Sp5g34540 Schrenkiella parvula
TAR629G0921 Trochodendron aralioides
THA.LOC104812381 Tarenaya hassleriana
Thecc.10G179300 Theobroma cacao
Thhalv10018121m.g Eutrema salsugineum
TPR.G31249 Trifolium pratense
TPR.G39331 Trifolium pratense
TWI36G0676 Tripterygium wilfordii
unitig_749.g13442 Utricularia gibba
vmacro11686 Vaccinium macrocarpon
VMungo0464G1450 Vigna mungo
Zm00001eb071030 Zea mays

User provided reference genes

Program Settings