Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p28870 Brassica napus
Aa31sc70G70 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2668 Anthoceros agrestis
Actinidia05326 Actinidia chinensis
AL4G34610 Arabidopsis lyrata
Aqoxy1G00876 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AE34S8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SHW8SI Arachis hypogaea
AT2G37680 Arabidopsis thaliana
ATR0559G120 Amborella trichopoda
Atru.chr8.2014 Acer truncatum
Atru.chr8.2015 Acer truncatum
AUR62042382 Chenopodium quinoa
AUR62043523 Chenopodium quinoa
BcaB06g29019 Brassica carinata
BcaC02g07499 Brassica carinata
BolC4t28116H Brassica oleracea
BraA04t18363Z Brassica rapa
C04p66130 Brassica napus
CAN.G324.16 Capsicum annuum
CANSAT35G1431 Cannabis sativa
CARHR131860 Cardamine hirsuta
Carub.0004s1963 Capsella rubella
Ca_20076_v3 Cicer arietinum L.
CBR_g30417 Chara braunii
Cc06_g02320 Coffea canephora
CDE06G1896 Ceratophyllum demersum
CDE07G0950 Ceratophyllum demersum
Ciclev10012735m.g Citrus clementina
CiPaw.09G195900 Carya illinoinensis
ClCG04G008030 Citrullus lanatus
COL.COLO4_14757 Corchorus olitorius
Cpa.g.c45575 Carica papaya
Cre17.g744497 Chlamydomonas reinhardtii
CsaV3_4G025180 Cucumis sativus L.
CSS0000536 Camellia sinensis var. sinensis
CSS0049441 Camellia sinensis var. sinensis
DCAR_012114 Daucus carota
Dinv35573 Davidia involucrata
Dinv37147 Davidia involucrata
Duzib093G0721 Durio zibethinus
Duzib128G0467 Durio zibethinus
ECA248G2752 Erigeron canadensis
EL10As1g23111 Beta vulgaris
EL10As1g23112 Beta vulgaris
Eucgr.K01475 Eucalyptus grandis
FAN02G2927 Fragaria x ananassa
FAN05G0090 Fragaria x ananassa
FAN14G1919 Fragaria x ananassa
FvH4_6g13220 Fragaria vesca
Glyma.01G100200 Glycine max
Glyma.03G068800 Glycine max
Gohir.A04G083900 Gossypium hirsutum
Gohir.D04G122700 Gossypium hirsutum
Gorai.012G105600 Gossypium raimondii
GSVIVG01034127001 Vitis vinifera
HanXRQChr13g0406901 Helianthus annuus
Haze_20829 Corylus avellana
Hma1.2p1_0766F.1_g215380 Hydrangea macrophylla
Hma1.2p1_0936F.1_g239015 Hydrangea macrophylla
Hma1.2p1_1082F.1_g255140 Hydrangea macrophylla
Hma1.2p1_1082F.1_g255150 Hydrangea macrophylla
Hma1.2p1_1082F.1_g255160 Hydrangea macrophylla
HPP92_000739 Vanilla planifolia
HPP92_000741 Vanilla planifolia
HPP92_026786 Vanilla planifolia
Lalb_Chr01g0013501 Lupinus albus
Lj3A964T54 Lonicera japonica
Lj3g0008944 Lotus japonicus
Lsat_1_v5_gn_5_153940 Lactuca sativa
Manes.09G092200 Manihot esculenta
Mapoly0038s0068 Marchantia polymorpha
Mapoly0050s0129 Marchantia polymorpha
MBI05_g35634_MAGBIO Magnolia biondii
MD04G1133400 Malus domestica
MD12G1146200 Malus domestica
Medtr4g020460 Medicago truncatula
Migut.J00304 Erythranthe guttata
MSTRG.19072 Avicennia marina
Nitab4.5_0000770g0150 Nicotiana tabacum
Nitab4.5_0005100g0070 Nicotiana tabacum
Nn2g11189 Nelumbo nucifera
Oeu007799.1 Olea europaea
Os01g0144200 Oryza sativa ssp. japonica
Os03g0679000 Oryza sativa ssp. japonica
Peaxi162Scf00094g00911 Petunia axillaris
PGR031G0341 Punica granatum
PGSC0003DMG400011070 Solanum tuberosum
Phvul.010G015600 Phaseolus vulgaris
Potri.016G100600 Populus trichocarpa
Pp3c27_5960 Physcomitrium patens
Pp3c6_13830 Physcomitrium patens
Prupe.6G259400 Prunus persica
Psat7g239840 Pisum sativum
PSO063G2683 Papaver somniferum
PSO339G2759 Papaver somniferum
QL07p030104 Quercus lobata
QL07p030908 Quercus lobata
RcHm_v2.0_Chr3g0465901 Rosa chinensis
RcHm_v2.0_Chr3g0465921 Rosa chinensis
RcHm_v2.0_Chr3g0465971 Rosa chinensis
RcHm_v2.0_Chr3g0466001 Rosa chinensis
RcHm_v2.0_Chr3g0466041 Rosa chinensis
RcHm_v2.0_Chr4g0436891 Rosa chinensis
RcHm_v2.0_Chr7g0189661 Rosa chinensis
Rhsim05G0195000 Rhododendron simsii
Sabra16G0101600 Salix brachista
Sc07g0007050 Simmondsia chinensis
Sed0022090 Sechium edule
SGA_v2.0_scaffold126G33759 Striga asiatica
SMO356G0269 Selaginella moellendorffii
Solyc10g084850.2 Solanum lycopersicum
Sopen10g034290 Solanum pennellii
Sp4g20060 Schrenkiella parvula
TAR623G0888 Trochodendron aralioides
THA.LOC104823414 Tarenaya hassleriana
Thecc.05G035400 Theobroma cacao
Thhalv10017226m.g Eutrema salsugineum
TPR.G17890 Trifolium pratense
TWI74G0393 Tripterygium wilfordii
unitig_21.g21010 Utricularia gibba
vmacro20179 Vaccinium macrocarpon
VMungo0331G1509 Vigna mungo
Zm00001eb124510 Zea mays
Zm00001eb335820 Zea mays

User provided reference genes

Program Settings