Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p28810 Brassica napus
Aa31LG9G11870 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4853 Anthoceros agrestis
AL6G43940 Arabidopsis lyrata
Aqoxy125s002 Aquilegia oxysepala
Aqoxy1G02088 Aquilegia oxysepala
Aqoxy1G04301 Aquilegia oxysepala
Aqoxy5G01267 Aquilegia oxysepala
Aqoxy7G04203 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7RGS7A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AI0I01 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MW41KC Arachis hypogaea
AT4G10130 Arabidopsis thaliana
ATR0605G347 Amborella trichopoda
Atru.chr13.649 Acer truncatum
BcaB01g01453 Brassica carinata
BcaB05g23918 Brassica carinata
BcaC04g21020 Brassica carinata
BolC9t56492H Brassica oleracea
BraA09t38443Z Brassica rapa
C02p42500 Brassica napus
C09p36600 Brassica napus
CAN.G1335.15 Capsicum annuum
CAN.G1422.7 Capsicum annuum
CANSAT11G1050 Cannabis sativa
CARHR261220 Cardamine hirsuta
Carub.0006s2870 Capsella rubella
Ca_14028_v3 Cicer arietinum L.
CBR_g3068 Chara braunii
Cc10_g04330 Coffea canephora
Cfa022483 Carpinus fangiana
Ciclev10003422m.g Citrus clementina
CiPaw.16G045900 Carya illinoinensis
ClCG08G015720 Citrullus lanatus
COL.COLO4_26477 Corchorus olitorius
Cpa.g.c24415.2 Carica papaya
CsaV3_2G028050 Cucumis sativus L.
CSS0015524 Camellia sinensis var. sinensis
CSS0029487 Camellia sinensis var. sinensis
Dinv39329 Davidia involucrata
Duzib093G0968 Durio zibethinus
Duzib116G0248 Durio zibethinus
ECA247G1332 Erigeron canadensis
EL10Ac3g05247 Beta vulgaris
Eucgr.F00241 Eucalyptus grandis
FAN15G1587 Fragaria x ananassa
FAN20G2285 Fragaria x ananassa
FAN27G2960 Fragaria x ananassa
FvH4_2g34630 Fragaria vesca
Glyma.11G102400 Glycine max
Glyma.12G141301 Glycine max
Gohir.A03G078312 Gossypium hirsutum
Gohir.D02G092000 Gossypium hirsutum
Gorai.005G103400 Gossypium raimondii
GSVIVG01018045001 Vitis vinifera
HanXRQChr02g0037671 Helianthus annuus
HanXRQChr12g0375061 Helianthus annuus
Haze_18960 Corylus avellana
Hma1.2p1_0982F.1_g243870 Hydrangea macrophylla
HPP92_016731 Vanilla planifolia
Lalb_Chr23g0267731 Lupinus albus
Lj1g0021003 Lotus japonicus
Lj3g0001779 Lotus japonicus
Lj3P736T14 Lonicera japonica
Lj4C53T13 Lonicera japonica
Lsat_1_v5_gn_1_20241 Lactuca sativa
Manes.03G089400 Manihot esculenta
Mapoly0103s0014 Marchantia polymorpha
Mapoly2945s0001 Marchantia polymorpha
MCO13G142 Micromonas commoda
MD08G1103500 Malus domestica
MD15G1084800 Malus domestica
Medtr3g006810 Medicago truncatula
Medtr4g074580 Medicago truncatula
Medtr6g003930 Medicago truncatula
MELO3C010884.2 Cucumis melo
Migut.N02701 Erythranthe guttata
MSTRG.22267 Avicennia marina
Nitab4.5_0000453g0220 Nicotiana tabacum
Nitab4.5_0004184g0060 Nicotiana tabacum
Nitab4.5_0004376g0080 Nicotiana tabacum
Nn5g30226 Nelumbo nucifera
Oeu011541.1 Olea europaea
Oeu011560.1 Olea europaea
Os08g0474600 Oryza sativa ssp. japonica
Os09g0460000 Oryza sativa ssp. japonica
PGR083G1082 Punica granatum
PGSC0003DMG400015418 Solanum tuberosum
Phvul.011G031400 Phaseolus vulgaris
Potri.014G032000 Populus trichocarpa
Pp3c14_21010 Physcomitrium patens
Pp3c18_17490 Physcomitrium patens
Prupe.1G438600 Prunus persica
Psat5g230280 Pisum sativum
Psat7g173600 Pisum sativum
PSO170G0070 Papaver somniferum
PSO210G1636 Papaver somniferum
PSO339G5974 Papaver somniferum
PSO801G0348 Papaver somniferum
QL02p005396 Quercus lobata
RcHm_v2.0_Chr6g0307451 Rosa chinensis
RcHm_v2.0_Chr7g0208301 Rosa chinensis
Sabra14G0022500 Salix brachista
Sc19g0008280 Simmondsia chinensis
Sed0021207 Sechium edule
SEGI_04975 Sequoiadendron giganteum
SGA_v2.0_scaffold168G38534 Striga asiatica
SGA_v2.0_scaffold208G41999 Striga asiatica
SGA_v2.0_scaffold62G21581 Striga asiatica
SHI08293 Sapria himalayana
Solyc12g088890.3 Solanum lycopersicum
Sopen12g030780 Solanum pennellii
Sp6g07290 Schrenkiella parvula
SpUn0121_0020 Schrenkiella parvula
TAR381G1315 Trochodendron aralioides
TAR628G0377 Trochodendron aralioides
THA.LOC104802577 Tarenaya hassleriana
Thecc.08G011000 Theobroma cacao
Thhalv10029407m.g Eutrema salsugineum
TPR.G32346 Trifolium pratense
TWI56G0989 Tripterygium wilfordii
unitig_19.g30010 Utricularia gibba
unitig_8.g5018 Utricularia gibba
VMungo1127G1488 Vigna mungo
Zm00001eb315040 Zea mays

User provided reference genes

Program Settings