Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p11680 Brassica napus
Aa31LG8G15210 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1381 Anthoceros agrestis
Actinidia22988 Actinidia chinensis
Ah.02g124470 Amaranthus hybridus
Ah.02g124490 Amaranthus hybridus
AL3G51180 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.IAHM14 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JKZZ7D Arachis hypogaea
AT2G18030 Arabidopsis thaliana
ATR0147G018 Amborella trichopoda
Atru.chr3.786 Acer truncatum
AUR62043612 Chenopodium quinoa
AUR62044454 Chenopodium quinoa
BcaB07g31695 Brassica carinata
BcaC04g22934 Brassica carinata
BolC9t54263H Brassica oleracea
BraA09t36813Z Brassica rapa
C09p13720 Brassica napus
CAN.G1671.2 Capsicum annuum
CAN.G724.41 Capsicum annuum
CARHR108520 Cardamine hirsuta
Carub.0003s3218 Capsella rubella
Ca_22370_v3 Cicer arietinum L.
CBR_g40417 Chara braunii
CBR_g40629 Chara braunii
Cc00_g23380 Coffea canephora
Cc00_g30270 Coffea canephora
Cc00_g33000 Coffea canephora
Cc00_g34170 Coffea canephora
Cc07_g10620 Coffea canephora
Cc07_g21120 Coffea canephora
CDE08G1305 Ceratophyllum demersum
Cfa006960 Carpinus fangiana
Ciclev10026355m.g Citrus clementina
CiPaw.07G057400 Carya illinoinensis
ClCG01G020180 Citrullus lanatus
COL.COLO4_21928 Corchorus olitorius
Cpa.g.sc6.232 Carica papaya
CsaV3_6G046980 Cucumis sativus L.
CSS0003821 Camellia sinensis var. sinensis
CSS0008295 Camellia sinensis var. sinensis
CSS0011847 Camellia sinensis var. sinensis
DCAR_021499 Daucus carota
Dinv40075 Davidia involucrata
Duzib147G1611 Durio zibethinus
Duzib264G0346 Durio zibethinus
ECA232G2345 Erigeron canadensis
Eucgr.J02409 Eucalyptus grandis
Eucgr.J02411 Eucalyptus grandis
Eucgr.J02417 Eucalyptus grandis
FAN02G1033 Fragaria x ananassa
FAN05G3534 Fragaria x ananassa
FAN09G1557 Fragaria x ananassa
FAN14G3764 Fragaria x ananassa
FvH4_6g24560 Fragaria vesca
Glyma.02G049400 Glycine max
Glyma.16G129800 Glycine max
Gohir.A12G060100 Gossypium hirsutum
Gohir.D12G060200 Gossypium hirsutum
Gorai.008G063300 Gossypium raimondii
GSVIVG01018799001 Vitis vinifera
HanXRQChr15g0487231 Helianthus annuus
Haze_03790 Corylus avellana
Hma1.2p1_0743F.1_g211546 Hydrangea macrophylla
Hma1.2p1_2281F.1_g318770 Hydrangea macrophylla
Hma1.2p1_2281F.1_g318780 Hydrangea macrophylla
HPP92_025838 Vanilla planifolia
Hund14040 Selenicereus undatus
Lalb_Chr05g0229871 Lupinus albus
Lalb_Chr16g0391201 Lupinus albus
Lj2A466G44 Lonicera japonica
Lj2A474G39 Lonicera japonica
Lj4g0023417 Lotus japonicus
Lsat_1_v5_gn_4_146701 Lactuca sativa
Lsat_1_v5_gn_4_146761 Lactuca sativa
Manes.02G103100 Manihot esculenta
Mapoly0044s0097 Marchantia polymorpha
Medtr8g076060 Medicago truncatula
MELO3C007891.2 Cucumis melo
Migut.H01151 Erythranthe guttata
MSTRG.2702 Avicennia marina
Nitab4.5_0004254g0050 Nicotiana tabacum
Nitab4.5_0005721g0040 Nicotiana tabacum
Nn5g29276 Nelumbo nucifera
Oeu062503.1 Olea europaea
Os06g0138100 Oryza sativa ssp. japonica
Peaxi162Scf00083g00821 Petunia axillaris
PGR119G1393 Punica granatum
PGSC0003DMG400003634 Solanum tuberosum
Phvul.003G260900 Phaseolus vulgaris
Potri.007G012900 Populus trichocarpa
Pp3c19_10080 Physcomitrium patens
Prupe.1G202800 Prunus persica
Psat4g098520 Pisum sativum
PSO541G4766 Papaver somniferum
PSO675G0258 Papaver somniferum
QL06p033557 Quercus lobata
RcHm_v2.0_Chr0c32g0501451 Rosa chinensis
RcHm_v2.0_Chr0c32g0501631 Rosa chinensis
RcHm_v2.0_Chr0c32g0501641 Rosa chinensis
RcHm_v2.0_Chr3g0483661 Rosa chinensis
RcHm_v2.0_Chr3g0483821 Rosa chinensis
Rhsim08G0034300 Rhododendron simsii
Sabra07G0009900 Salix brachista
SalBow3G3717 Salvia bowleyana
Sc16g0002060 Simmondsia chinensis
Sed0020033 Sechium edule
SEGI_08967 Sequoiadendron giganteum
SGA_v2.0_scaffold137G35079 Striga asiatica
SMO239G0133 Selaginella moellendorffii
SMO239G0139 Selaginella moellendorffii
SMO239G0160 Selaginella moellendorffii
Solyc02g084030.3 Solanum lycopersicum
Sopen02g028830 Solanum pennellii
Sp3g31460 Schrenkiella parvula
TAR625G1510 Trochodendron aralioides
THA.LOC104807489 Tarenaya hassleriana
Thecc.01G020800 Theobroma cacao
Thhalv10022823m.g Eutrema salsugineum
TPR.G30060 Trifolium pratense
TWI09G0870 Tripterygium wilfordii
unitig_37.g12157 Utricularia gibba
vmacro18419 Vaccinium macrocarpon
VMungo0251G2049 Vigna mungo
Zm00001eb377760 Zea mays

User provided reference genes

Program Settings