Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p40690 Brassica napus
A09p03560 Brassica napus
Aa31LG2G4770 Aethionema arabicum
Actinidia22255 Actinidia chinensis
Ah.04g149860 Amaranthus hybridus
Ah.13g077610 Amaranthus hybridus
AL5G17560 Arabidopsis lyrata
Aqoxy2G04072 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2YV87W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J5F3TG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N8122S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZJXU8Q Arachis hypogaea
AT3G28040 Arabidopsis thaliana
ATR1145G093 Amborella trichopoda
Atru.chr3.1753 Acer truncatum
AUR62018487 Chenopodium quinoa
AUR62020933 Chenopodium quinoa
BcaB04g19453 Brassica carinata
BcaC04g23885 Brassica carinata
BcaC06g30936 Brassica carinata
BcaC06g33759 Brassica carinata
BolC7t44238H Brassica oleracea
BolC9t53304H Brassica oleracea
BraA06t26990Z Brassica rapa
BraA09t35994Z Brassica rapa
C07p37290 Brassica napus
C09p03800 Brassica napus
CAN.G710.45 Capsicum annuum
CAN.G790.38 Capsicum annuum
CANSAT78G1098 Cannabis sativa
CARHR149660 Cardamine hirsuta
Carub.0005s0656 Capsella rubella
Ca_07121_v3 Cicer arietinum L.
Cc03_g10700 Coffea canephora
CDE05G0271 Ceratophyllum demersum
CDE05G1275 Ceratophyllum demersum
CDE06G1491 Ceratophyllum demersum
Cfa008705 Carpinus fangiana
Ciclev10004238m.g Citrus clementina
CiPaw.01G109300 Carya illinoinensis
ClCG07G015750 Citrullus lanatus
COL.COLO4_08081 Corchorus olitorius
Cpa.g.sc1561.1 Carica papaya
CsaV3_4G003470 Cucumis sativus L.
CSS0012357 Camellia sinensis var. sinensis
DCAR_005497 Daucus carota
Dinv22711 Davidia involucrata
Dinv44208 Davidia involucrata
Duzib151G0858 Durio zibethinus
ECA238G0431 Erigeron canadensis
EL10Ac3g07396 Beta vulgaris
Eucgr.H02618 Eucalyptus grandis
FAN07G1438 Fragaria x ananassa
FAN12G0100 Fragaria x ananassa
FAN12G2502 Fragaria x ananassa
FAN17G0341 Fragaria x ananassa
FAN22G1462 Fragaria x ananassa
FvH4_4g12350 Fragaria vesca
Glyma.02G097400 Glycine max
Glyma.18G284100 Glycine max
Gohir.A09G209700 Gossypium hirsutum
Gohir.D09G203100 Gossypium hirsutum
Gorai.006G227000 Gossypium raimondii
GSVIVG01031658001 Vitis vinifera
HanXRQChr01g0020491 Helianthus annuus
HanXRQChr03g0075681 Helianthus annuus
HanXRQChr10g0293891 Helianthus annuus
Haze_11714 Corylus avellana
Hma1.2p1_0412F.1_g147260 Hydrangea macrophylla
HPP92_024660 Vanilla planifolia
Hund24460 Selenicereus undatus
Lalb_Chr04g0258031 Lupinus albus
Lalb_Chr10g0092071 Lupinus albus
Lj1g0013706 Lotus japonicus
Lj3A235T29 Lonicera japonica
Lj3A238T25 Lonicera japonica
Lsat_1_v5_gn_1_69381 Lactuca sativa
Lsat_1_v5_gn_2_51180 Lactuca sativa
Manes.05G194900 Manihot esculenta
MBI07_g25672_MAGBIO Magnolia biondii
MD04G1027600 Malus domestica
Medtr0073s0020 Medicago truncatula
Medtr7g022010 Medicago truncatula
Medtr7g022050 Medicago truncatula
Medtr7g022160 Medicago truncatula
MELO3C017706.2 Cucumis melo
Migut.N00449 Erythranthe guttata
MSTRG.24601 Avicennia marina
Nitab4.5_0001526g0040 Nicotiana tabacum
Nitab4.5_0012487g0030 Nicotiana tabacum
Nn1g09757 Nelumbo nucifera
Oeu013404.1 Olea europaea
Os01g0957100 Oryza sativa ssp. japonica
Peaxi162Scf00286g00326 Petunia axillaris
PGR083G0047 Punica granatum
PGSC0003DMG400021609 Solanum tuberosum
Phvul.008G017400 Phaseolus vulgaris
Potri.002G233600 Populus trichocarpa
Potri.014G147300 Populus trichocarpa
Prupe.1G177000 Prunus persica
Psat3g188280 Pisum sativum
PSO017G1774 Papaver somniferum
PSO675G1515 Papaver somniferum
QL06p027667 Quercus lobata
RcHm_v2.0_Chr4g0410441 Rosa chinensis
Rhsim02G0071400 Rhododendron simsii
Sabra02G0178300 Salix brachista
Sabra14G0110600 Salix brachista
SalBow6G3697 Salvia bowleyana
Sc19g0007650 Simmondsia chinensis
Sed0020531 Sechium edule
SGA_v2.0_scaffold178G39524 Striga asiatica
Solyc09g098290.3 Solanum lycopersicum
Sopen09g036220 Solanum pennellii
Sp2g17040 Schrenkiella parvula
TAR365G0718 Trochodendron aralioides
THA.LOC104805402 Tarenaya hassleriana
THA.LOC104825296 Tarenaya hassleriana
Thecc.04G186500 Theobroma cacao
Thhalv10003580m.g Eutrema salsugineum
TPR.G2911 Trifolium pratense
TPR.G39960 Trifolium pratense
TWI73G0098 Tripterygium wilfordii
VMungo1383G0336 Vigna mungo
Zm00001eb140560 Zea mays
Zm00001eb362650 Zea mays

User provided reference genes

Program Settings