Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p43840 Brassica napus
Aa31LG2G1690 Aethionema arabicum
Actinidia22206 Actinidia chinensis
Ah.07g197960 Amaranthus hybridus
Ah.07g197970 Amaranthus hybridus
AL5G31010 Arabidopsis lyrata
Aqoxy5G04325 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4R2AWH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UX12II Arachis hypogaea
AT3G50790 Arabidopsis thaliana
ATR0620G137 Amborella trichopoda
Atru.chr9.1883 Acer truncatum
Atru.chr9.1884 Acer truncatum
AUR62007053 Chenopodium quinoa
AUR62019917 Chenopodium quinoa
BcaB01g00581 Brassica carinata
BcaC07g39541 Brassica carinata
BolC8t50210H Brassica oleracea
BraA09t39843Z Brassica rapa
C08p25940 Brassica napus
CAN.G567.87 Capsicum annuum
CANSAT21G1252 Cannabis sativa
CARHR160330 Cardamine hirsuta
Carub.0005s1714 Capsella rubella
Ca_19615_v3 Cicer arietinum L.
CBR_g21949 Chara braunii
Cc08_g16740 Coffea canephora
CDE02G1387 Ceratophyllum demersum
Cfa011924 Carpinus fangiana
Cfa023458 Carpinus fangiana
Ciclev10020407m.g Citrus clementina
CiPaw.11G112300 Carya illinoinensis
CiPaw.11G112400 Carya illinoinensis
ClCG01G001520 Citrullus lanatus
COL.COLO4_09661 Corchorus olitorius
COL.COLO4_10795 Corchorus olitorius
Cpa.g.sc667.1 Carica papaya
Cre06.g278263 Chlamydomonas reinhardtii
CsaV3_5G001670 Cucumis sativus L.
CSS0009967 Camellia sinensis var. sinensis
CSS0044313 Camellia sinensis var. sinensis
DCAR_006544 Daucus carota
Dinv12929 Davidia involucrata
Duzib084G1017 Durio zibethinus
Duzib213G0835 Durio zibethinus
ECA246G0103 Erigeron canadensis
ECA246G4932 Erigeron canadensis
EL10Ac5g12429 Beta vulgaris
Eucgr.E01038 Eucalyptus grandis
FAN08G1643 Fragaria x ananassa
FAN13G2815 Fragaria x ananassa
FAN18G4334 Fragaria x ananassa
FvH4_5g10900 Fragaria vesca
Glyma.09G223100 Glycine max
Glyma.12G013800 Glycine max
Gohir.A02G098200 Gossypium hirsutum
Gohir.A11G018800 Gossypium hirsutum
Gohir.A13G138200 Gossypium hirsutum
Gohir.D03G085400 Gossypium hirsutum
Gohir.D11G018500 Gossypium hirsutum
Gohir.D13G143000 Gossypium hirsutum
Gorai.003G076900 Gossypium raimondii
Gorai.007G019800 Gossypium raimondii
Gorai.013G159900 Gossypium raimondii
GSVIVG01019651001 Vitis vinifera
HanXRQChr17g0534251 Helianthus annuus
HanXRQChr17g0534261 Helianthus annuus
HanXRQChr17g0534271 Helianthus annuus
Haze_09175 Corylus avellana
HPP92_007398 Vanilla planifolia
Hund11346 Selenicereus undatus
Lalb_Chr19g0140111 Lupinus albus
Lj3g0001615 Lotus japonicus
Lj8A200T58 Lonicera japonica
Lsat_1_v5_gn_3_14280 Lactuca sativa
Lsat_1_v5_gn_3_14300 Lactuca sativa
Manes.02G003000 Manihot esculenta
Mapoly0062s0096 Marchantia polymorpha
MCO12G402 Micromonas commoda
MD06G1118600 Malus domestica
MD14G1126700 Malus domestica
Medtr0004s0330 Medicago truncatula
MELO3C005785.2 Cucumis melo
Migut.E00630 Erythranthe guttata
MSTRG.2019 Avicennia marina
Nitab4.5_0004251g0080 Nicotiana tabacum
Nitab4.5_0007063g0080 Nicotiana tabacum
Nn1g00385 Nelumbo nucifera
Oeu010739.1 Olea europaea
Os02g0649400 Oryza sativa ssp. japonica
Peaxi162Scf00074g00231 Petunia axillaris
PGR042G0096 Punica granatum
Phvul.011G016800 Phaseolus vulgaris
Potri.003G146500 Populus trichocarpa
Pp3c25_10320 Physcomitrium patens
Pp3c6_260 Physcomitrium patens
PRCOL_00002939 Prasinoderma coloniale
Prupe.5G129700 Prunus persica
Psat0s3988g0080 Pisum sativum
PSO063G2528 Papaver somniferum
PSO782G3785 Papaver somniferum
QL02p028110 Quercus lobata
QL02p028147 Quercus lobata
RcHm_v2.0_Chr7g0186911 Rosa chinensis
Rhsim02G0252100 Rhododendron simsii
Sabra03G0106700 Salix brachista
Sc01g0010680 Simmondsia chinensis
Sed0018039 Sechium edule
SEGI_30363 Sequoiadendron giganteum
SGA_v2.0_scaffold267G46187 Striga asiatica
SMO111G0132 Selaginella moellendorffii
Solyc08g083080.3 Solanum lycopersicum
Solyc08g083140.4 Solanum lycopersicum
Sopen08g031320 Solanum pennellii
Sopen08g031360 Solanum pennellii
Sp5g11430 Schrenkiella parvula
TAR629G1551 Trochodendron aralioides
THA.LOC104809304 Tarenaya hassleriana
Thecc.03G221200 Theobroma cacao
Thecc.07G037100 Theobroma cacao
Thhalv10010419m.g Eutrema salsugineum
TWI60G0850 Tripterygium wilfordii
unitig_22.g5513 Utricularia gibba
vmacro11500 Vaccinium macrocarpon
VMungo1127G0845 Vigna mungo
Zm00001eb186220 Zea mays

User provided reference genes

Program Settings