Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p39400 Brassica napus
Aa31LG3G2080 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2816 Anthoceros agrestis
Actinidia04697 Actinidia chinensis
Actinidia19716 Actinidia chinensis
Ah.08g211920 Amaranthus hybridus
AL3G20870 Arabidopsis lyrata
Aqoxy4G03188 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C871DQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SD4I8G Arachis hypogaea
AT3G09660 Arabidopsis thaliana
ATR1159G085 Amborella trichopoda
Atru.chr8.2554 Acer truncatum
AUR62040504 Chenopodium quinoa
AUR62042605 Chenopodium quinoa
BcaC05g29691 Brassica carinata
BolC5t34495H Brassica oleracea
BraA05t22721Z Brassica rapa
C05p58430 Brassica napus
CAN.G608.18 Capsicum annuum
CANSAT80G1962 Cannabis sativa
CARHR084070 Cardamine hirsuta
Carub.0003s0875 Capsella rubella
Ca_08824_v3 Cicer arietinum L.
CBR_g21769 Chara braunii
Cc06_g03540 Coffea canephora
Cc11_g00290 Coffea canephora
CDE04G1259 Ceratophyllum demersum
CDE04G3548 Ceratophyllum demersum
Cfa017506 Carpinus fangiana
Ciclev10013573m.g Citrus clementina
CiPaw.09G180100 Carya illinoinensis
ClCG10G020570 Citrullus lanatus
COL.COLO4_27084 Corchorus olitorius
Cpa.g.sc114.44 Carica papaya
Cpa.g.sc114.46 Carica papaya
Cre16.g665950 Chlamydomonas reinhardtii
CsaV3_3G035520 Cucumis sativus L.
CSS0035526 Camellia sinensis var. sinensis
CSS0036867 Camellia sinensis var. sinensis
DCAR_020872 Daucus carota
Dinv37251 Davidia involucrata
Duzib128G0222 Durio zibethinus
ECA233G2985 Erigeron canadensis
EL10Ac7g17349 Beta vulgaris
Eucgr.A01177 Eucalyptus grandis
FAN02G4129 Fragaria x ananassa
FAN05G4916 Fragaria x ananassa
FAN09G3820 Fragaria x ananassa
FAN14G3803 Fragaria x ananassa
FvH4_3g39260 Fragaria vesca
FvH4_4g24480 Fragaria vesca
FvH4_6g15280 Fragaria vesca
Glyma.02G170600 Glycine max
Glyma.19G178600 Glycine max
Gohir.A01G215900 Gossypium hirsutum
Gohir.D01G204700 Gossypium hirsutum
Gorai.002G248900 Gossypium raimondii
GSVIVG01025534001 Vitis vinifera
GSVIVG01025535001 Vitis vinifera
HanXRQChr13g0399761 Helianthus annuus
Haze_20652 Corylus avellana
Hma1.2p1_0111F.1_g053870 Hydrangea macrophylla
HPP92_019800 Vanilla planifolia
Hund20156 Selenicereus undatus
Lalb_Chr20g0112951 Lupinus albus
Lj1g0004431 Lotus japonicus
Lj2C107G5 Lonicera japonica
Lsat_1_v5_gn_6_29641 Lactuca sativa
Manes.08G003200 Manihot esculenta
Mapoly0006s0301 Marchantia polymorpha
MBI14_g43289_MAGBIO Magnolia biondii
MBI14_g45130_MAGBIO Magnolia biondii
MBI14_g47375_MAGBIO Magnolia biondii
MBI14_g47376_MAGBIO Magnolia biondii
MCO15G371 Micromonas commoda
MD04G1104500 Malus domestica
Medtr7g100680 Medicago truncatula
MELO3C009313.2 Cucumis melo
Migut.J00416 Erythranthe guttata
MSTRG.5719 Avicennia marina
MSTRG.5720 Avicennia marina
Nitab4.5_0001142g0060 Nicotiana tabacum
Nitab4.5_0009766g0010 Nicotiana tabacum
Nn2g10649 Nelumbo nucifera
Oeu029422.1 Olea europaea
Os05g0464100 Oryza sativa ssp. japonica
Peaxi162Scf00005g04713 Petunia axillaris
PGR004G1754 Punica granatum
Phvul.001G174700 Phaseolus vulgaris
Potri.006G131900 Populus trichocarpa
Pp3c19_1120 Physcomitrium patens
Pp3c24_12060 Physcomitrium patens
PRCOL_00006464 Prasinoderma coloniale
Prupe.6G241500 Prunus persica
Psat3g045560 Pisum sativum
PSO063G5136 Papaver somniferum
PSO339G3031 Papaver somniferum
QL07p045302 Quercus lobata
RcHm_v2.0_Chr3g0468711 Rosa chinensis
RhsimUnG0118500 Rhododendron simsii
Sabra06G0103500 Salix brachista
Sc07g0006240 Simmondsia chinensis
Sed0028064 Sechium edule
SEGI_29349 Sequoiadendron giganteum
SEGI_37013 Sequoiadendron giganteum
SGA_v2.0_scaffold126G33895 Striga asiatica
SGA_v2.0_scaffold9G05073 Striga asiatica
SHI12574 Sapria himalayana
SMO356G0297 Selaginella moellendorffii
Solyc09g007330.4 Solanum lycopersicum
Sopen09g002210 Solanum pennellii
Sp3g07990 Schrenkiella parvula
TAR624G1010 Trochodendron aralioides
TAR636G0149 Trochodendron aralioides
TAR636G0796 Trochodendron aralioides
THA.LOC104816318 Tarenaya hassleriana
Thecc.05G053700 Theobroma cacao
Thhalv10020112m.g Eutrema salsugineum
TPR.G36915 Trifolium pratense
TWI74G0816 Tripterygium wilfordii
unitig_578.g15710 Utricularia gibba
vmacro20063 Vaccinium macrocarpon
VMungo1383G2364 Vigna mungo
VMungo1383G2461 Vigna mungo
Zm00001eb351640 Zea mays

User provided reference genes

Program Settings