Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia03134 Actinidia chinensis
Actinidia14583 Actinidia chinensis
Actinidia14584 Actinidia chinensis
Actinidia28362 Actinidia chinensis
Actinidia31835 Actinidia chinensis
Actinidia34148 Actinidia chinensis
Ah.07g196520 Amaranthus hybridus
Ah.07g206700 Amaranthus hybridus
ATR0661G323 Amborella trichopoda
Atru.chr1.369 Acer truncatum
Atru.chr1.386 Acer truncatum
Atru.chr9.2147 Acer truncatum
Atru.chr9.2148 Acer truncatum
Atru.ctg97_1.2 Acer truncatum
AUR62010719 Chenopodium quinoa
AUR62027265 Chenopodium quinoa
AUR62027266 Chenopodium quinoa
AUR62031403 Chenopodium quinoa
CAN.G236.7 Capsicum annuum
Cc02_g02490 Coffea canephora
CDE04G0350 Ceratophyllum demersum
CDE07G1099 Ceratophyllum demersum
CDE07G1237 Ceratophyllum demersum
Cfa012198 Carpinus fangiana
Ciclev10004200m.g Citrus clementina
COL.COLO4_28015 Corchorus olitorius
Cpa.g.sc107.93 Carica papaya
Cpa.g.sc107.94 Carica papaya
Cpa.g.sc107.97 Carica papaya
CSS0035854 Camellia sinensis var. sinensis
CSS0044230 Camellia sinensis var. sinensis
DCAR_009389 Daucus carota
DCAR_010663 Daucus carota
DCAR_020266 Daucus carota
Dinv28394 Davidia involucrata
Dinv35242 Davidia involucrata
Dinv35243 Davidia involucrata
Dinv35244 Davidia involucrata
Dinv37613 Davidia involucrata
Dinv38916 Davidia involucrata
Duzib084G0535 Durio zibethinus
Duzib205G1471 Durio zibethinus
ECA232G3189 Erigeron canadensis
ECA233G6261 Erigeron canadensis
ECA238G4706 Erigeron canadensis
EL10Ac3g05437 Beta vulgaris
EL10Ac5g12809 Beta vulgaris
EL10Ac5g12810 Beta vulgaris
EL10Ac5g12811 Beta vulgaris
FAN01G2627 Fragaria x ananassa
FAN03G1328 Fragaria x ananassa
FAN03G3330 Fragaria x ananassa
FAN06G3118 Fragaria x ananassa
FAN06G3804 Fragaria x ananassa
FAN10G1026 Fragaria x ananassa
FAN10G1355 Fragaria x ananassa
FvH4_7g30110 Fragaria vesca
Gohir.A10G234800 Gossypium hirsutum
Gohir.D10G247200 Gossypium hirsutum
Gorai.011G285600 Gossypium raimondii
GSVIVG01019397001 Vitis vinifera
GSVIVG01028875001 Vitis vinifera
HanXRQChr09g0252481 Helianthus annuus
HanXRQChr13g0394821 Helianthus annuus
HanXRQChr14g0462471 Helianthus annuus
HanXRQChr17g0533291 Helianthus annuus
Haze_00034 Corylus avellana
Haze_08819 Corylus avellana
Hma1.2p1_0327F.1_g126380 Hydrangea macrophylla
HPP92_025630 Vanilla planifolia
HPP92_028522 Vanilla planifolia
HPP92_028523 Vanilla planifolia
HPP92_028524 Vanilla planifolia
HPP92_028535 Vanilla planifolia
HPP92_028536 Vanilla planifolia
Hund11448 Selenicereus undatus
Lj1C1004T5 Lonicera japonica
Lsat_1_v5_gn_2_131160 Lactuca sativa
Lsat_1_v5_gn_3_6981 Lactuca sativa
Lsat_1_v5_gn_6_5180 Lactuca sativa
Lsat_1_v5_gn_9_57440 Lactuca sativa
Manes.02G019000 Manihot esculenta
MBI04_g35056_MAGBIO Magnolia biondii
MD01G1207000 Malus domestica
MD07G1277900 Malus domestica
Migut.F00307 Erythranthe guttata
MSTRG.27091 Avicennia marina
MSTRG.8718 Avicennia marina
Nn1g01606 Nelumbo nucifera
Nn1g01607 Nelumbo nucifera
Oeu060456.3 Olea europaea
Os08g0430000 Oryza sativa ssp. japonica
Peaxi162Scf00444g00008 Petunia axillaris
Peaxi162Scf00618g00717 Petunia axillaris
PGSC0003DMG400010123 Solanum tuberosum
Potri.004G079000 Populus trichocarpa
Potri.017G142600 Populus trichocarpa
Prupe.2G299600 Prunus persica
PSO478G1013 Papaver somniferum
PSO782G1175 Papaver somniferum
QL12p032277 Quercus lobata
RcHm_v2.0_Chr1g0378101 Rosa chinensis
RcHm_v2.0_Chr5g0081641 Rosa chinensis
Rhsim03G0190100 Rhododendron simsii
Rhsim07G0129200 Rhododendron simsii
Rhsim07G0129400 Rhododendron simsii
Sabra04G0052500 Salix brachista
SalBow4G0794 Salvia bowleyana
Sc22g0005410 Simmondsia chinensis
Solyc03g025150.4 Solanum lycopersicum
Sopen03g004000 Solanum pennellii
TAR374G1318 Trochodendron aralioides
TAR375G0196 Trochodendron aralioides
TAR629G2332 Trochodendron aralioides
Thecc.03G182600 Theobroma cacao
TWI14G0178 Tripterygium wilfordii
TWI23G0587 Tripterygium wilfordii
TWI60G0847 Tripterygium wilfordii
unitig_37.g11967 Utricularia gibba
unitig_46.g18802 Utricularia gibba
unitig_52.g17733 Utricularia gibba
unitig_52.g17734 Utricularia gibba
unitig_747.g21861 Utricularia gibba
vmacro06637 Vaccinium macrocarpon
vmacro06638 Vaccinium macrocarpon
Zm00001eb156140 Zea mays
Zm00001eb179470 Zea mays

User provided reference genes

Program Settings