Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p23530 Brassica napus
A10p19130 Brassica napus
Aa31LG1G13850 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4006 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4009 Anthoceros agrestis
Actinidia01322 Actinidia chinensis
AL6G32470 Arabidopsis lyrata
Aqoxy1G01834 Aquilegia oxysepala
Aqoxy7G00970 Aquilegia oxysepala
Aqoxy7G04170 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9Z4RH8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GHB8SH Arachis hypogaea
AT5G20910 Arabidopsis thaliana
ATR0099G001 Amborella trichopoda
ATR0099G078 Amborella trichopoda
Atru.chr7.1811 Acer truncatum
AUR62038076 Chenopodium quinoa
AUR62038171 Chenopodium quinoa
BcaC04g19487 Brassica carinata
BcaC08g43979 Brassica carinata
BcaNung05757 Brassica carinata
BolC6t36554H Brassica oleracea
BraA09t37955Z Brassica rapa
C06p13820 Brassica napus
C09p55200 Brassica napus
CANSAT25G3535 Cannabis sativa
CARHR191940 Cardamine hirsuta
Carub.0006s1920 Capsella rubella
Ca_13085_v3 Cicer arietinum L.
CBR_g17961 Chara braunii
Cc08_g07820 Coffea canephora
CDE06G2470 Ceratophyllum demersum
Cfa017843 Carpinus fangiana
Ciclev10008969m.g Citrus clementina
CiPaw.16G071800 Carya illinoinensis
ClCG05G015970 Citrullus lanatus
COL.COLO4_21172 Corchorus olitorius
Cpa.g.sc82.22 Carica papaya
CsaV3_4G036260 Cucumis sativus L.
CSS0031449 Camellia sinensis var. sinensis
DCAR_004369 Daucus carota
Dinv40947 Davidia involucrata
Dinv40948 Davidia involucrata
Duzib150G1135 Durio zibethinus
ECA240G1377 Erigeron canadensis
EL10As3g23312 Beta vulgaris
Eucgr.C03179 Eucalyptus grandis
FAN06G0753 Fragaria x ananassa
FAN06G3381 Fragaria x ananassa
FAN07G0416 Fragaria x ananassa
FAN10G1603 Fragaria x ananassa
FAN21G0679 Fragaria x ananassa
FAN21G1538 Fragaria x ananassa
FAN23G0804 Fragaria x ananassa
FAN25G1293 Fragaria x ananassa
FvH4_2g37060 Fragaria vesca
Glyma.14G105900 Glycine max
Glyma.17G220500 Glycine max
Gohir.A06G081400 Gossypium hirsutum
Gohir.D06G081000 Gossypium hirsutum
Gorai.010G094400 Gossypium raimondii
GSVIVG01035508001 Vitis vinifera
GSVIVG01035510001 Vitis vinifera
HanXRQChr09g0248291 Helianthus annuus
Haze_18365 Corylus avellana
Hma1.2p1_0920F.1_g236580 Hydrangea macrophylla
HPP92_002370 Vanilla planifolia
HPP92_027597 Vanilla planifolia
Lalb_Chr24g0393731 Lupinus albus
Lj5g0022807 Lotus japonicus
Lj7C205T1 Lonicera japonica
Lsat_1_v5_gn_7_59260 Lactuca sativa
Manes.16G088000 Manihot esculenta
Mapoly0027s0101 Marchantia polymorpha
MBI13_g01682_MAGBIO Magnolia biondii
MD08G1042800 Malus domestica
MD08G1045000 Malus domestica
MD08G1045700 Malus domestica
MD15G1046800 Malus domestica
MD15G1054900 Malus domestica
Medtr1g014710 Medicago truncatula
MELO3C016933.2 Cucumis melo
Migut.E01466 Erythranthe guttata
MSTRG.1634 Avicennia marina
Nitab4.5_0009154g0010 Nicotiana tabacum
Nitab4.5_0015655g0010 Nicotiana tabacum
Nn8g38527 Nelumbo nucifera
Os09g0434200 Oryza sativa ssp. japonica
Peaxi162Scf00251g00048 Petunia axillaris
Peaxi162Scf00251g00411 Petunia axillaris
Peaxi162Scf00922g00002 Petunia axillaris
PGR044G1353 Punica granatum
PGSC0003DMG400007377 Solanum tuberosum
Phvul.001G043900 Phaseolus vulgaris
Potri.006G217600 Populus trichocarpa
Pp3c11_13800 Physcomitrium patens
Pp3c1_42450 Physcomitrium patens
Pp3c2_5960 Physcomitrium patens
Psat6g024320 Pisum sativum
PSO063G5133 Papaver somniferum
PSO104G0089 Papaver somniferum
PSO135G0672 Papaver somniferum
PSO170G1450 Papaver somniferum
PSO173G0169 Papaver somniferum
PSO421G0352 Papaver somniferum
PSO421G0433 Papaver somniferum
PSO724G0255 Papaver somniferum
RcHm_v2.0_Chr6g0304721 Rosa chinensis
Rhsim12G0139000 Rhododendron simsii
Sabra06G0167800 Salix brachista
Sc25g0004450 Simmondsia chinensis
Sed0005903 Sechium edule
SEGI_35365 Sequoiadendron giganteum
SMO011G0034 Selaginella moellendorffii
Solyc08g067290.3 Solanum lycopersicum
Sopen08g021220 Solanum pennellii
Sp6g23610 Schrenkiella parvula
TAR624G0119 Trochodendron aralioides
THA.LOC104810973 Tarenaya hassleriana
Thecc.09G066800 Theobroma cacao
Thhalv10014170m.g Eutrema salsugineum
TPR.G38904 Trifolium pratense
TWI63G0835 Tripterygium wilfordii
unitig_0.g2182 Utricularia gibba
vmacro16415 Vaccinium macrocarpon
VMungo0647G2039 Vigna mungo
Zm00001eb099970 Zea mays

User provided reference genes

Program Settings