Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p34910 Brassica napus
Aa31LG5G17430 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4083 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4084 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4087 Anthoceros agrestis
Actinidia19577 Actinidia chinensis
Actinidia40296 Actinidia chinensis
Ah.04g153650 Amaranthus hybridus
AL3G17970 Arabidopsis lyrata
Aqoxy5G00779 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.632TA6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BZZQ7R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D6BPEW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QU6QXS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W1BVEK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YC35GQ Arachis hypogaea
AT3G06850 Arabidopsis thaliana
ATR0796G192 Amborella trichopoda
Atru.chr4.2892 Acer truncatum
AUR62018093 Chenopodium quinoa
AUR62032016 Chenopodium quinoa
BcaC09g47924 Brassica carinata
BNapus_Darmor_BZH_scaffold_117p00130 Brassica napus
BolC1t05582H Brassica oleracea
BolC3t16519H Brassica oleracea
BraA01t04410Z Brassica rapa
BraA03t12671Z Brassica rapa
C03p42490 Brassica napus
CAN.G1137.1 Capsicum annuum
CANSAT78G2398 Cannabis sativa
CARHR081460 Cardamine hirsuta
Carub.0003s0638 Capsella rubella
Ca_21482_v3 Cicer arietinum L.
Cc03_g01610 Coffea canephora
CDE12G0277 Ceratophyllum demersum
Cfa014702 Carpinus fangiana
Cfa024475 Carpinus fangiana
Ciclev10004761m.g Citrus clementina
CiPaw.01G145900 Carya illinoinensis
ClCG05G006220 Citrullus lanatus
Cpa.g.sc50.171 Carica papaya
Cre04.g228350 Chlamydomonas reinhardtii
CsaV3_3G014830 Cucumis sativus L.
CSS0044303 Camellia sinensis var. sinensis
Dinv44356 Davidia involucrata
Duzib212G0824 Durio zibethinus
ECA246G2476 Erigeron canadensis
EL10Ac3g06632 Beta vulgaris
Eucgr.H03953 Eucalyptus grandis
FvH4_2g21082 Fragaria vesca
FvH4_4g18561 Fragaria vesca
FvH4_4g29931 Fragaria vesca
Glyma.07G246000 Glycine max
Glyma.17G028000 Glycine max
Gohir.A09G237700 Gossypium hirsutum
Gohir.D09G238600 Gossypium hirsutum
Gorai.006G261300 Gossypium raimondii
GSVIVG01035121001 Vitis vinifera
HanXRQChr03g0089531 Helianthus annuus
HanXRQChr17g0536081 Helianthus annuus
Haze_13326 Corylus avellana
Hma1.2p1_0804F.1_g220990 Hydrangea macrophylla
Hma1.2p1_0804F.1_g221000 Hydrangea macrophylla
Hma1.2p1_0804F.1_g221010 Hydrangea macrophylla
HPP92_002152 Vanilla planifolia
HPP92_002232 Vanilla planifolia
Hund20525 Selenicereus undatus
Lalb_Chr12g0196651 Lupinus albus
Lj4g0021722 Lotus japonicus
Lj6A680T85 Lonicera japonica
Lsat_1_v5_gn_3_117300 Lactuca sativa
Lsat_1_v5_gn_3_17620 Lactuca sativa
Lsat_1_v5_gn_3_24121 Lactuca sativa
Lsat_1_v5_gn_4_18420 Lactuca sativa
Lsat_1_v5_gn_7_19781 Lactuca sativa
Lsat_1_v5_gn_8_104680 Lactuca sativa
Manes.03G198100 Manihot esculenta
Mapoly0127s0040 Marchantia polymorpha
MBI19_g30024_MAGBIO Magnolia biondii
MBI19_g34790_MAGBIO Magnolia biondii
MD13G1165700 Malus domestica
Medtr4g120220 Medicago truncatula
MELO3C006679.2 Cucumis melo
Migut.G00134 Erythranthe guttata
MSTRG.10111 Avicennia marina
Nitab4.5_0000695g0030 Nicotiana tabacum
Nitab4.5_0005312g0020 Nicotiana tabacum
Nn3g21531 Nelumbo nucifera
Os01g0314100 Oryza sativa ssp. japonica
Peaxi162Scf00065g01524 Petunia axillaris
PGR004G0333 Punica granatum
PGSC0003DMG400011330 Solanum tuberosum
Phvul.003G106700 Phaseolus vulgaris
Potri.008G219700 Populus trichocarpa
Potri.010G011300 Populus trichocarpa
Pp3c7_200 Physcomitrium patens
PRCOL_00005061 Prasinoderma coloniale
Prupe.1G132500 Prunus persica
Psat4g026280 Pisum sativum
PSO210G3438 Papaver somniferum
PSO832G1872 Papaver somniferum
QL06p010151 Quercus lobata
RcHm_v2.0_Chr4g0423151 Rosa chinensis
Rhsim04G0224800 Rhododendron simsii
Sabra10G0007300 Salix brachista
SalBow2G1825 Salvia bowleyana
Sc13g0003290 Simmondsia chinensis
Sed0017832 Sechium edule
SEGI_10371 Sequoiadendron giganteum
SEGI_31717 Sequoiadendron giganteum
SEGI_36599 Sequoiadendron giganteum
SGA_v2.0_scaffold67G22605 Striga asiatica
SMO356G0665 Selaginella moellendorffii
Solyc01g066520.3 Solanum lycopersicum
Sopen01g028100 Solanum pennellii
Sp3g05810 Schrenkiella parvula
TAR362G0149 Trochodendron aralioides
THA.LOC104818913 Tarenaya hassleriana
Thecc.04G288000 Theobroma cacao
Thhalv10020615m.g Eutrema salsugineum
TPR.G3182 Trifolium pratense
TWI09G1463 Tripterygium wilfordii
TWI73G1204 Tripterygium wilfordii
unitig_748.g8725 Utricularia gibba
vmacro08180 Vaccinium macrocarpon
VMungo1215G0560 Vigna mungo
Zm00001eb130640 Zea mays

User provided reference genes

Program Settings