Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p20380 Brassica napus
A07p28630 Brassica napus
A07p41490 Brassica napus
Aa31LG4G6130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1002 Anthoceros agrestis
Actinidia15453 Actinidia chinensis
Actinidia17011 Actinidia chinensis
Ah.06g187190 Amaranthus hybridus
AL2G36000 Arabidopsis lyrata
Aqoxy5G01831 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.89BLSN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SEC0EX Arachis hypogaea
AT1G75980 Arabidopsis thaliana
ATR1088G027 Amborella trichopoda
Atru.chr13.240 Acer truncatum
AUR62013912 Chenopodium quinoa
AUR62018279 Chenopodium quinoa
BcaB02g07052 Brassica carinata
BcaB05g24966 Brassica carinata
BcaC03g15638 Brassica carinata
BcaC08g45544 Brassica carinata
BcaC08g47309 Brassica carinata
BolC2t09353H Brassica oleracea
BolC6t38347H Brassica oleracea
BolC6t40028H Brassica oleracea
BraA07t30504Z Brassica rapa
BraA07t31681Z Brassica rapa
C02p33520 Brassica napus
C06p32240 Brassica napus
C06p49900 Brassica napus
CAN.G311.58 Capsicum annuum
CANSAT25G1322 Cannabis sativa
CANSAT25G3730 Cannabis sativa
CANSAT80G2378 Cannabis sativa
CARHR069510 Cardamine hirsuta
Carub.0002s2287 Capsella rubella
Carub.0005s0222 Capsella rubella
Ca_15473_v3 Cicer arietinum L.
CBR_g54848 Chara braunii
Cc10_g01280 Coffea canephora
Cc10_g01290 Coffea canephora
CDE04G3084 Ceratophyllum demersum
Cfa013993 Carpinus fangiana
Ciclev10002478m.g Citrus clementina
CiPaw.07G144900 Carya illinoinensis
ClCG05G015490 Citrullus lanatus
COL.COLO4_26102 Corchorus olitorius
Cpa.g.sc26.282 Carica papaya
CsaV3_3G046060 Cucumis sativus L.
CSS0005676 Camellia sinensis var. sinensis
CSS0039588 Camellia sinensis var. sinensis
DCAR_009503 Daucus carota
Dinv31883 Davidia involucrata
Duzib041G0142 Durio zibethinus
Duzib093G1443 Durio zibethinus
EL10Ac1g02129 Beta vulgaris
Eucgr.F03725 Eucalyptus grandis
Eucgr.F03727 Eucalyptus grandis
FAN11G1504 Fragaria x ananassa
FAN21G0515 Fragaria x ananassa
FAN25G2739 Fragaria x ananassa
FvH4_3g18360 Fragaria vesca
Glyma.02G160800 Glycine max
Glyma.04G021700 Glycine max
Glyma.06G021900 Glycine max
Gohir.A01G109400 Gossypium hirsutum
Gohir.D01G096200 Gossypium hirsutum
Gorai.002G121700 Gossypium raimondii
HanXRQChr13g0386921 Helianthus annuus
Haze_22683 Corylus avellana
HPP92_025438 Vanilla planifolia
Hund01696 Selenicereus undatus
Lalb_Chr23g0266051 Lupinus albus
Lj1g0006385 Lotus japonicus
Lsat_1_v5_gn_4_111221 Lactuca sativa
Lsat_1_v5_gn_8_29640 Lactuca sativa
Manes.18G010300 Manihot esculenta
Mapoly0001s0313 Marchantia polymorpha
MCO13G478 Micromonas commoda
MD03G1242500 Malus domestica
MD11G1262900 Malus domestica
Medtr3g114470 Medicago truncatula
Medtr6g083100 Medicago truncatula
MELO3C003734.2 Cucumis melo
Migut.C00887 Erythranthe guttata
MSTRG.1158 Avicennia marina
Nitab4.5_0004361g0040 Nicotiana tabacum
Nn5g30812 Nelumbo nucifera
Oeu033622.1 Olea europaea
Os02g0120400 Oryza sativa ssp. japonica
Peaxi162Scf00860g00212 Petunia axillaris
PGR083G2507 Punica granatum
PGSC0003DMG400009949 Solanum tuberosum
Phvul.009G018900 Phaseolus vulgaris
Potri.002G018100 Populus trichocarpa
Pp3c20_3890 Physcomitrium patens
PRCOL_00005216 Prasinoderma coloniale
Prupe.4G165400 Prunus persica
Psat5g012560 Pisum sativum
PSO339G6481 Papaver somniferum
PSO384G0480 Papaver somniferum
QL02p012562 Quercus lobata
RcHm_v2.0_Chr5g0031011 Rosa chinensis
Rhsim06G0015300 Rhododendron simsii
Rhsim06G0017400 Rhododendron simsii
Sabra02G0014400 Salix brachista
SalBow7G2905 Salvia bowleyana
Sc15g0004750 Simmondsia chinensis
Sed0008956 Sechium edule
SEGI_18034 Sequoiadendron giganteum
SGA_v2.0_scaffold292G47375 Striga asiatica
SHI08014 Sapria himalayana
SMO367G0408 Selaginella moellendorffii
Solyc04g081850.4 Solanum lycopersicum
Sopen04g035480 Solanum pennellii
Sp5g31100 Schrenkiella parvula
TAR625G0502 Trochodendron aralioides
THA.LOC104811433 Tarenaya hassleriana
Thecc.08G049400 Theobroma cacao
Thhalv10019087m.g Eutrema salsugineum
TPR.G38152 Trifolium pratense
TPR.G38171 Trifolium pratense
TWI12G0400 Tripterygium wilfordii
unitig_32.g11202 Utricularia gibba
vmacro21863 Vaccinium macrocarpon
VMungo1215G3215 Vigna mungo
Zm00001eb209250 Zea mays

User provided reference genes

Program Settings