Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p44380 Brassica napus
Aa31sc76G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.671 Anthoceros agrestis
Ah.01g001800 Amaranthus hybridus
AL3G42180 Arabidopsis lyrata
Aqoxy1G04108 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.L1XSI7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T4YVHB Arachis hypogaea
AT2G04540 Arabidopsis thaliana
ATR1101G028 Amborella trichopoda
Atru.chr6.3280 Acer truncatum
Atru.chr6.3296 Acer truncatum
AUR62015104 Chenopodium quinoa
AUR62015105 Chenopodium quinoa
AUR62017566 Chenopodium quinoa
BcaB03g16111 Brassica carinata
BcaB08g34480 Brassica carinata
BcaC01g03196 Brassica carinata
BcaNung05983 Brassica carinata
BolC3t17774H Brassica oleracea
BraA03t13568Z Brassica rapa
C03p54990 Brassica napus
CAN.G741.31 Capsicum annuum
CAN.G784.5 Capsicum annuum
CANSAT64G0309 Cannabis sativa
CARHR102430 Cardamine hirsuta
Carub.0003s2617 Capsella rubella
Ca_09638_v3 Cicer arietinum L.
CBR_g41120 Chara braunii
Cc04_g10360 Coffea canephora
CDE07G0785 Ceratophyllum demersum
Cfa014296 Carpinus fangiana
Ciclev10015116m.g Citrus clementina
CiPaw.04G192900 Carya illinoinensis
ClCG02G018200 Citrullus lanatus
COL.COLO4_05386 Corchorus olitorius
Cpa.g.sc132.49 Carica papaya
Cpa.g.sc132.50 Carica papaya
Cre10.g438050 Chlamydomonas reinhardtii
CsaV3_6G015580 Cucumis sativus L.
CSS0040036 Camellia sinensis var. sinensis
CSS0049875 Camellia sinensis var. sinensis
DCAR_019736 Daucus carota
Dinv08704 Davidia involucrata
Duzib133G0031 Durio zibethinus
Duzib138G1396 Durio zibethinus
ECA236G4050 Erigeron canadensis
EL10Ac9g22789 Beta vulgaris
Eucgr.K00728 Eucalyptus grandis
Eucgr.L03681 Eucalyptus grandis
FAN02G0028 Fragaria x ananassa
FAN05G5831 Fragaria x ananassa
FAN09G3712 Fragaria x ananassa
FAN14G0144 Fragaria x ananassa
FvH4_6g41780 Fragaria vesca
Glyma.10G041100 Glycine max
Glyma.13G128000 Glycine max
Gohir.A11G151800 Gossypium hirsutum
Gohir.D11G158800 Gossypium hirsutum
Gorai.007G169200 Gossypium raimondii
GSVIVG01030537001 Vitis vinifera
HanXRQChr16g0508321 Helianthus annuus
Haze_12744 Corylus avellana
Haze_27082 Corylus avellana
Hma1.2p1_0133F.1_g060830 Hydrangea macrophylla
Hma1.2p1_0133F.1_g060840 Hydrangea macrophylla
HPP92_002526 Vanilla planifolia
Hund24128 Selenicereus undatus
Hund24130 Selenicereus undatus
Hund24199 Selenicereus undatus
Lalb_Chr06g0170771 Lupinus albus
Lj1A785G51 Lonicera japonica
Lj5g0007920 Lotus japonicus
Lsat_1_v5_gn_6_99820 Lactuca sativa
Lsat_1_v5_gn_7_94701 Lactuca sativa
Manes.13G064800 Manihot esculenta
Mapoly0191s0005 Marchantia polymorpha
MBI13_g30073_MAGBIO Magnolia biondii
MCO02G400 Micromonas commoda
MCO03G093 Micromonas commoda
MD09G1117200 Malus domestica
Medtr1g069385 Medicago truncatula
MELO3C019716.2 Cucumis melo
Migut.F02001 Erythranthe guttata
MSTRG.27459 Avicennia marina
Nitab4.5_0000130g0180 Nicotiana tabacum
Nitab4.5_0008746g0030 Nicotiana tabacum
Nn1g07966 Nelumbo nucifera
Oeu043936.2 Olea europaea
Os02g0196900 Oryza sativa ssp. japonica
Peaxi162Scf01333g00134 Petunia axillaris
PGR004G0976 Punica granatum
PGSC0003DMG400006426 Solanum tuberosum
Phvul.007G154300 Phaseolus vulgaris
Potri.002G219500 Populus trichocarpa
Pp3c13_3620 Physcomitrium patens
Prupe.3G206600 Prunus persica
Psat5g269320 Pisum sativum
Psat6g064320 Pisum sativum
PSO210G3553 Papaver somniferum
PSO302G0194 Papaver somniferum
QL08p029874 Quercus lobata
QL08p029882 Quercus lobata
RcHm_v2.0_Chr2g0157571 Rosa chinensis
Rhsim06G0170000 Rhododendron simsii
Sabra02G0171100 Salix brachista
SalBow4G1832 Salvia bowleyana
SalBow8G3370 Salvia bowleyana
Sc20g0005080 Simmondsia chinensis
Sed0016142 Sechium edule
SEGI_02920 Sequoiadendron giganteum
SGA_v2.0_scaffold478G52232 Striga asiatica
SMO203G0198 Selaginella moellendorffii
Solyc07g049570.3 Solanum lycopersicum
Sopen07g024970 Solanum pennellii
Sp3g23320 Schrenkiella parvula
TAR624G0711 Trochodendron aralioides
THA.LOC104808867 Tarenaya hassleriana
Thecc.01G187600 Theobroma cacao
Thhalv10002523m.g Eutrema salsugineum
TPR.G17941 Trifolium pratense
TPR.G35707 Trifolium pratense
TWI75G0266 Tripterygium wilfordii
unitig_85.g27432 Utricularia gibba
vmacro12143 Vaccinium macrocarpon
VMungo0720G0104 Vigna mungo
Zm00001eb236130 Zea mays

User provided reference genes

Program Settings