Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p35920 Brassica napus
Aa31LG6G11770 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4712 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4751 Anthoceros agrestis
Actinidia33686 Actinidia chinensis
Ah.04g153410 Amaranthus hybridus
AL1G44564 Arabidopsis lyrata
Aqoxy1G00111 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.D0AYNK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T5Y52R Arachis hypogaea
AT1G30520 Arabidopsis thaliana
ATR0165G033 Amborella trichopoda
Atru.chr10.844 Acer truncatum
AUR62029373 Chenopodium quinoa
AUR62030087 Chenopodium quinoa
BcaB07g32664 Brassica carinata
BcaB07g32688 Brassica carinata
BcaC05g27073 Brassica carinata
BolC5t31685H Brassica oleracea
BraA09t39117Z Brassica rapa
C05p29540 Brassica napus
CAN.G79.33 Capsicum annuum
CANSAT35G1370 Cannabis sativa
CARHR029940 Cardamine hirsuta
Carub.0001s2876 Capsella rubella
Ca_00844_v3 Cicer arietinum L.
CBR_g21135 Chara braunii
Cc09_g04180 Coffea canephora
CDE03G0252 Ceratophyllum demersum
CDE06G2571 Ceratophyllum demersum
Cfa000807 Carpinus fangiana
Ciclev10017814m.g Citrus clementina
CiPaw.09G141800 Carya illinoinensis
CiPaw.10G109200 Carya illinoinensis
ClCG01G025160 Citrullus lanatus
ClCG01G025170 Citrullus lanatus
COL.COLO4_26836 Corchorus olitorius
COL.COLO4_26837 Corchorus olitorius
Cpa.g.sc166.41 Carica papaya
Cre01.g030900 Chlamydomonas reinhardtii
CsaV3_6G052370 Cucumis sativus L.
CSS0003732 Camellia sinensis var. sinensis
DCAR_004839 Daucus carota
DCAR_004840 Daucus carota
Dinv10791 Davidia involucrata
Duzib235G0404 Durio zibethinus
ECA236G2888 Erigeron canadensis
EL10Ac1g01132 Beta vulgaris
Eucgr.D00163 Eucalyptus grandis
Eucgr.D00173 Eucalyptus grandis
Eucgr.D00174 Eucalyptus grandis
FAN11G3594 Fragaria x ananassa
FAN16G2954 Fragaria x ananassa
FAN21G3676 Fragaria x ananassa
FAN25G2274 Fragaria x ananassa
FvH4_3g10160 Fragaria vesca
Glyma.09G024500 Glycine max
Glyma.15G130500 Glycine max
Gohir.A05G110600 Gossypium hirsutum
Gohir.D05G111000 Gossypium hirsutum
Gorai.009G115300 Gossypium raimondii
GSVIVG01021658001 Vitis vinifera
HanXRQChr04g0116481 Helianthus annuus
HanXRQChr13g0420361 Helianthus annuus
HanXRQChr13g0426451 Helianthus annuus
HanXRQChr13g0426461 Helianthus annuus
Haze_05866 Corylus avellana
Hund19369 Selenicereus undatus
Lalb_Chr20g0120061 Lupinus albus
Lj2C330T2 Lonicera japonica
Lj6g0025648 Lotus japonicus
Lsat_1_v5_gn_7_27381 Lactuca sativa
Manes.03G112150 Manihot esculenta
Mapoly0097s0040 Marchantia polymorpha
MBI18_g11292_MAGBIO Magnolia biondii
MBI18_g11293_MAGBIO Magnolia biondii
MBI18_g11294_MAGBIO Magnolia biondii
MD05G1272800 Malus domestica
MD10G1252900 Malus domestica
Medtr2g030240 Medicago truncatula
MELO3C007073.2 Cucumis melo
Migut.H01327 Erythranthe guttata
MSTRG.16292 Avicennia marina
MSTRG.16293 Avicennia marina
Nitab4.5_0001225g0090 Nicotiana tabacum
Nitab4.5_0001583g0010 Nicotiana tabacum
Nn4g26677 Nelumbo nucifera
Oeu008957.2 Olea europaea
Os08g0130400 Oryza sativa ssp. japonica
Peaxi162Scf00276g00122 Petunia axillaris
PGR083G1101 Punica granatum
PGSC0003DMG400021188 Solanum tuberosum
Phvul.006G128100 Phaseolus vulgaris
Potri.011G164100 Populus trichocarpa
Pp3c10_3810 Physcomitrium patens
PRCOL_00003528 Prasinoderma coloniale
Prupe.4G090600 Prunus persica
Psat1g167440 Pisum sativum
PSO675G1789 Papaver somniferum
PSO675G5523 Papaver somniferum
QL05p062500 Quercus lobata
RcHm_v2.0_Chr5g0016071 Rosa chinensis
Rhsim13G0121500 Rhododendron simsii
SalBow7G0208 Salvia bowleyana
Sc10g0005430 Simmondsia chinensis
Sc10g0006290 Simmondsia chinensis
Sed0014236 Sechium edule
SEGI_10060 Sequoiadendron giganteum
SGA_v2.0_scaffold51G18657 Striga asiatica
SMO119G0066 Selaginella moellendorffii
Solyc02g069920.4 Solanum lycopersicum
Sopen02g018910 Solanum pennellii
Sopen02g019060 Solanum pennellii
Sp1g26370 Schrenkiella parvula
TAR627G0736 Trochodendron aralioides
THA.LOC104812864 Tarenaya hassleriana
THA.LOC104814347 Tarenaya hassleriana
Thecc.06G002500 Theobroma cacao
Thhalv10007264m.g Eutrema salsugineum
TPR.G26348 Trifolium pratense
TWI15G0677 Tripterygium wilfordii
unitig_21.g20626 Utricularia gibba
vmacro03383 Vaccinium macrocarpon
vmacro03384 Vaccinium macrocarpon
vmacro03452 Vaccinium macrocarpon
vmacro03453 Vaccinium macrocarpon
VMungo0540G1641 Vigna mungo
Zm00001eb261830 Zea mays

User provided reference genes

Program Settings