Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p11390 Brassica napus
Aa31LG9G17110 Aethionema arabicum
Actinidia15885 Actinidia chinensis
Actinidia36322 Actinidia chinensis
AL7G52230 Arabidopsis lyrata
Aqoxy3G03957 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5T0UVN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.80Z7L9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8IQW6A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A87HRQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FD2CEU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GQQ1MZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IRK6TR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PRIQ1K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QBFC9G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QHM34M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RE0KC5 Arachis hypogaea
AT5G38380 Arabidopsis thaliana
ATR1125G113 Amborella trichopoda
Atru.chr1.1695 Acer truncatum
AUR62009001 Chenopodium quinoa
AUR62023301 Chenopodium quinoa
BcaB02g08011 Brassica carinata
BcaB06g27198 Brassica carinata
BcaC02g09645 Brassica carinata
BcaC04g24063 Brassica carinata
BolC4t26080H Brassica oleracea
BraA04t16801Z Brassica rapa
C04p45020 Brassica napus
CANSAT78G2127 Cannabis sativa
CARHR214220 Cardamine hirsuta
Carub.0007s3769 Capsella rubella
Ca_13730_v3 Cicer arietinum L.
CBR_g65298 Chara braunii
Cc07_g08800 Coffea canephora
Cc07_g08810 Coffea canephora
CDE02G0503 Ceratophyllum demersum
CDE02G4721 Ceratophyllum demersum
Ciclev10012061m.g Citrus clementina
CiPaw.03G061500 Carya illinoinensis
ClCG05G011660 Citrullus lanatus
COL.COLO4_09333 Corchorus olitorius
Cpa.g.sc282.8 Carica papaya
CsaV3_3G020710 Cucumis sativus L.
CSS0013578 Camellia sinensis var. sinensis
CSS0045838 Camellia sinensis var. sinensis
ECA238G0211 Erigeron canadensis
EL10Ac2g04565 Beta vulgaris
Eucgr.G01883 Eucalyptus grandis
Eucgr.H04974 Eucalyptus grandis
Eucgr.L03301 Eucalyptus grandis
FAN03G3320 Fragaria x ananassa
FAN06G1752 Fragaria x ananassa
FAN06G4019 Fragaria x ananassa
FAN10G1204 Fragaria x ananassa
FAN10G1546 Fragaria x ananassa
FvH4_7g12860 Fragaria vesca
Glyma.13G045900 Glycine max
Glyma.19G049100 Glycine max
Gohir.A12G053700 Gossypium hirsutum
Gohir.D12G052400 Gossypium hirsutum
Gorai.008G055500 Gossypium raimondii
GSVIVG01031021001 Vitis vinifera
HanXRQChr13g0396101 Helianthus annuus
HanXRQChr14g0438471 Helianthus annuus
Haze_14153 Corylus avellana
Hma1.2p1_0136F.1_g062270 Hydrangea macrophylla
Hma1.2p1_0239F.1_g099920 Hydrangea macrophylla
HPP92_020146 Vanilla planifolia
Hund13715 Selenicereus undatus
Lalb_Chr06g0174551 Lupinus albus
Lj2g0022404 Lotus japonicus
Lj4A191G46 Lonicera japonica
Lsat_1_v5_gn_2_79301 Lactuca sativa
Manes.02G068700 Manihot esculenta
Mapoly0135s0006 Marchantia polymorpha
MD02G1195600 Malus domestica
MD07G1125200 Malus domestica
MD07G1125400 Malus domestica
Medtr6g018620 Medicago truncatula
MELO3C023807.2 Cucumis melo
Migut.H00218 Erythranthe guttata
Nitab4.5_0000659g0030 Nicotiana tabacum
Nitab4.5_0000912g0210 Nicotiana tabacum
Nn4g23886 Nelumbo nucifera
Oeu008428.1 Olea europaea
Oeu030786.4 Olea europaea
Os07g0283200 Oryza sativa ssp. japonica
Peaxi162Scf00394g00621 Petunia axillaris
Peaxi162Scf00394g00622 Petunia axillaris
PGR042G1089 Punica granatum
PGSC0003DMG400026393 Solanum tuberosum
Phvul.004G065800 Phaseolus vulgaris
Potri.017G115200 Populus trichocarpa
Pp3c6_6620 Physcomitrium patens
Prupe.2G152900 Prunus persica
Psat1g081360 Pisum sativum
PSO063G1031 Papaver somniferum
PSO782G1071 Papaver somniferum
QL02p051369 Quercus lobata
RcHm_v2.0_Chr1g0351931 Rosa chinensis
RcHm_v2.0_Chr1g0351941 Rosa chinensis
Rhsim10G0067300 Rhododendron simsii
Sabra17G0095400 Salix brachista
SalBow3G1182 Salvia bowleyana
Sc11g0008330 Simmondsia chinensis
Sed0021803 Sechium edule
SEGI_09013 Sequoiadendron giganteum
SGA_v2.0_scaffold33G13506 Striga asiatica
SHI11016 Sapria himalayana
SHI22341 Sapria himalayana
SHI22412 Sapria himalayana
SMO196G0121 Selaginella moellendorffii
Solyc02g086060.4 Solanum lycopersicum
Solyc02g086070.2 Solanum lycopersicum
Sopen02g030750 Solanum pennellii
Sp7g03650 Schrenkiella parvula
TAR374G0830 Trochodendron aralioides
THA.LOC104823860 Tarenaya hassleriana
Thecc.04G133700 Theobroma cacao
Thhalv10027811m.g Eutrema salsugineum
TPR.G32473 Trifolium pratense
TWI77G0942 Tripterygium wilfordii
unitig_0.g7 Utricularia gibba
vmacro05555 Vaccinium macrocarpon
VMungo0464G1087 Vigna mungo
Zm00001eb156340 Zea mays
Zm00001eb360540 Zea mays

User provided reference genes

Program Settings