Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p38350 Brassica napus
Aa31sc113G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1790 Anthoceros agrestis
Actinidia10192 Actinidia chinensis
Actinidia22689 Actinidia chinensis
AL1G41280 Arabidopsis lyrata
AL4G19860 Arabidopsis lyrata
Aqoxy5G00884 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0QZG7W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6NC3R4 Arachis hypogaea
AT1G27750 Arabidopsis thaliana
ATR0208G021 Amborella trichopoda
Atru.chr13.820 Acer truncatum
AUR62037434 Chenopodium quinoa
AUR62038814 Chenopodium quinoa
BcaB03g13969 Brassica carinata
BcaC05g26775 Brassica carinata
BcaC06g35319 Brassica carinata
BolC5t31365H Brassica oleracea
BolC7t42252H Brassica oleracea
BolC7t42255H Brassica oleracea
BraA09t39344Z Brassica rapa
C05p26440 Brassica napus
C07p17470 Brassica napus
CANSAT25G1585 Cannabis sativa
CARHR027260 Cardamine hirsuta
Carub.0001s2626 Capsella rubella
Ca_13223_v3 Cicer arietinum L.
Ca_13228_v3 Cicer arietinum L.
Ca_22944_v3 Cicer arietinum L.
CBR_g6294 Chara braunii
CBR_g6612 Chara braunii
Cc10_g05690 Coffea canephora
CDE06G0223 Ceratophyllum demersum
Cfa010207 Carpinus fangiana
Cfa013681 Carpinus fangiana
Ciclev10003334m.g Citrus clementina
CiPaw.07G175900 Carya illinoinensis
ClCG05G020550 Citrullus lanatus
Cpa.g.sc142.15 Carica papaya
Cpa.g.sc142.16 Carica papaya
Cre09.g398030 Chlamydomonas reinhardtii
CsaV3_4G034990 Cucumis sativus L.
CSS0015613 Camellia sinensis var. sinensis
DCAR_008854 Daucus carota
Dinv44962 Davidia involucrata
Duzib116G0273 Durio zibethinus
ECA247G3074 Erigeron canadensis
EL10Ac1g02391 Beta vulgaris
Eucgr.F02258 Eucalyptus grandis
FAN15G3244 Fragaria x ananassa
FAN20G0949 Fragaria x ananassa
FAN24G0874 Fragaria x ananassa
FAN27G0954 Fragaria x ananassa
FvH4_2g33220 Fragaria vesca
Glyma.14G088600 Glycine max
Glyma.17G235900 Glycine max
Gohir.A05G209500 Gossypium hirsutum
Gohir.D05G212700 Gossypium hirsutum
Gorai.009G219200 Gossypium raimondii
GSVIVG01009356001 Vitis vinifera
HanXRQChr08g0220641 Helianthus annuus
Haze_22323 Corylus avellana
Haze_22324 Corylus avellana
HPP92_019611 Vanilla planifolia
Hund24034 Selenicereus undatus
Lalb_Chr22g0355571 Lupinus albus
Lalb_Chr22g0355581 Lupinus albus
Lalb_Chr22g0355591 Lupinus albus
Lalb_Chr24g0399421 Lupinus albus
Lj4A759T48 Lonicera japonica
Lj5g0015061 Lotus japonicus
Lsat_1_v5_gn_1_24340 Lactuca sativa
Manes.05G181200 Manihot esculenta
Mapoly0006s0231 Marchantia polymorpha
MD08G1086000 Malus domestica
Medtr1g018350 Medicago truncatula
MELO3C016811.2 Cucumis melo
MSTRG.1026 Avicennia marina
Nitab4.5_0000164g0150 Nicotiana tabacum
Nitab4.5_0003803g0020 Nicotiana tabacum
Nn5g30557 Nelumbo nucifera
Oeu022102.3 Olea europaea
Os01g0765200 Oryza sativa ssp. japonica
Os01g0765300 Oryza sativa ssp. japonica
Peaxi162Scf00081g01617 Petunia axillaris
PGSC0003DMG400024243 Solanum tuberosum
PGSC0003DMG400024244 Solanum tuberosum
Phvul.001G026900 Phaseolus vulgaris
Potri.014G017000 Populus trichocarpa
Pp3c24_10810 Physcomitrium patens
Prupe.1G423900 Prunus persica
Psat0ss2518g0200 Pisum sativum
Psat0ss2518g0240 Pisum sativum
Psat1g176640 Pisum sativum
Psat4g136520 Pisum sativum
Psat5g005720 Pisum sativum
Psat5g005800 Pisum sativum
Psat6g016280 Pisum sativum
PSO017G6116 Papaver somniferum
QL12p037902 Quercus lobata
RcHm_v2.0_Chr6g0309441 Rosa chinensis
RcHm_v2.0_Chr6g0309451 Rosa chinensis
Rhsim07G0220800 Rhododendron simsii
Sabra14G0010800 Salix brachista
SalBow7G0276 Salvia bowleyana
Sc15g0005720 Simmondsia chinensis
Sed0027780 Sechium edule
SEGI_08589 Sequoiadendron giganteum
SGA_v2.0_scaffold238G43965 Striga asiatica
SHI08393 Sapria himalayana
SHI08394 Sapria himalayana
SMO143G0029 Selaginella moellendorffii
Solyc04g077940.4 Solanum lycopersicum
Solyc04g077950.2 Solanum lycopersicum
Sopen04g031540 Solanum pennellii
Sopen05g013150 Solanum pennellii
Sp1g23980 Schrenkiella parvula
TAR381G0870 Trochodendron aralioides
TAR381G1003 Trochodendron aralioides
TAR633G2582 Trochodendron aralioides
Thecc.08G090000 Theobroma cacao
Thhalv10006638m.g Eutrema salsugineum
TPR.G3779 Trifolium pratense
TWI56G1003 Tripterygium wilfordii
vmacro22059 Vaccinium macrocarpon
VMungo0647G0280 Vigna mungo
Zm00001eb152180 Zea mays

User provided reference genes

Program Settings