Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p14980 Brassica napus
Actinidia34497 Actinidia chinensis
AL4G25360 Arabidopsis lyrata
Aqoxy1G01263 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4PHV2I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F8RHVN Arachis hypogaea
AT2G30480 Arabidopsis thaliana
ATR1127G002 Amborella trichopoda
ATR1127G234 Amborella trichopoda
Atru.chr10.2293 Acer truncatum
AUR62001158 Chenopodium quinoa
AUR62016518 Chenopodium quinoa
BcaB02g10326 Brassica carinata
BcaC02g11137 Brassica carinata
BolC4t23545H Brassica oleracea
BolC4t23546H Brassica oleracea
BraA05t20424Z Brassica rapa
BraA05t20425Z Brassica rapa
C04p20070 Brassica napus
CANSAT54G2173 Cannabis sativa
CARHR123920 Cardamine hirsuta
CARHR123930 Cardamine hirsuta
Carub.0004s1164 Capsella rubella
Ca_15060_v3 Cicer arietinum L.
Ca_15061_v3 Cicer arietinum L.
Ca_22416_v3 Cicer arietinum L.
Ciclev10001550m.g Citrus clementina
Ciclev10004023m.g Citrus clementina
CiPaw.13G063300 Carya illinoinensis
ClCG02G019020 Citrullus lanatus
COL.COLO4_11217 Corchorus olitorius
Cpa.g.sc2.293 Carica papaya
Cpa.g.sc2.294 Carica papaya
CsaV3_6G013130 Cucumis sativus L.
CSS0014829 Camellia sinensis var. sinensis
CSS0035069 Camellia sinensis var. sinensis
DCAR_018642 Daucus carota
Dinv28733 Davidia involucrata
Duzib168G1492 Durio zibethinus
ECA247G3209 Erigeron canadensis
EL10Ac7g17950 Beta vulgaris
Eucgr.B04029 Eucalyptus grandis
FAN11G1956 Fragaria x ananassa
FAN16G1217 Fragaria x ananassa
FAN21G1070 Fragaria x ananassa
FAN25G3378 Fragaria x ananassa
FvH4_3g40550 Fragaria vesca
Glyma.11G198000 Glycine max
Glyma.11G198150 Glycine max
Glyma.18G052000 Glycine max
Gohir.1Z049434 Gossypium hirsutum
Gohir.1Z049529 Gossypium hirsutum
Gohir.A05G417101 Gossypium hirsutum
Gohir.A08G000032 Gossypium hirsutum
Gohir.D01G148301 Gossypium hirsutum
Gohir.D01G155850 Gossypium hirsutum
Gohir.D08G007350 Gossypium hirsutum
Gohir.D12G000401 Gossypium hirsutum
Gorai.002G184200 Gossypium raimondii
Gorai.002G193100 Gossypium raimondii
Gorai.004G000600 Gossypium raimondii
Gorai.012G000300 Gossypium raimondii
GSVIVG01024555001 Vitis vinifera
GSVIVG01024556001 Vitis vinifera
HanXRQChr08g0230341 Helianthus annuus
Haze_24474 Corylus avellana
Hma1.2p1_0119F.1_g056956 Hydrangea macrophylla
HPP92_015425 Vanilla planifolia
Hund18459 Selenicereus undatus
Lalb_Chr18g0054191 Lupinus albus
Lalb_Chr18g0054201 Lupinus albus
Lj2A1102G26 Lonicera japonica
Lj6g0005873 Lotus japonicus
Lsat_1_v5_gn_9_13760 Lactuca sativa
Manes.02G212232 Manihot esculenta
MBI15_g36478_MAGBIO Magnolia biondii
MD11G1053200 Malus domestica
MD11G1053300 Malus domestica
Medtr3g467390 Medicago truncatula
MELO3C019578.2 Cucumis melo
Migut.D00817 Erythranthe guttata
Nitab4.5_0000002g0280 Nicotiana tabacum
Nitab4.5_0000734g0140 Nicotiana tabacum
Nitab4.5_0000734g0160 Nicotiana tabacum
Nitab4.5_0001868g0030 Nicotiana tabacum
Nitab4.5_0001946g0060 Nicotiana tabacum
Nn2g10289 Nelumbo nucifera
Oeu064683.1 Olea europaea
Os01g0167700 Oryza sativa ssp. japonica
Peaxi162Scf00605g00515 Petunia axillaris
PGR102G3245 Punica granatum
PGSC0003DMG401006272 Solanum tuberosum
PGSC0003DMG402006272 Solanum tuberosum
Phvul.006G079400 Phaseolus vulgaris
Potri.013G157800 Populus trichocarpa
Prupe.6G040800 Prunus persica
Psat5g147960 Pisum sativum
PSO017G1347 Papaver somniferum
PSO170G4823 Papaver somniferum
PSO384G0550 Papaver somniferum
PSO384G2371 Papaver somniferum
PSO423G0168 Papaver somniferum
QL01p024477 Quercus lobata
QL08p064976 Quercus lobata
RcHm_v2.0_Chr5g0073231 Rosa chinensis
Rhsim01G0243500 Rhododendron simsii
SalBow6G5906 Salvia bowleyana
Sc23g0005090 Simmondsia chinensis
Sed0007856 Sechium edule
SGA_v2.0_scaffold120G32989 Striga asiatica
SGA_v2.0_scaffold20G09288 Striga asiatica
Solyc09g005140.2 Solanum lycopersicum
Sopen09g001120 Solanum pennellii
Sp4g13010 Schrenkiella parvula
TAR633G1590 Trochodendron aralioides
TAR636G0755 Trochodendron aralioides
TAR636G3352 Trochodendron aralioides
THA.LOC104815825 Tarenaya hassleriana
Thecc.09G364100 Theobroma cacao
Thhalv10017756m.g Eutrema salsugineum
Thhalv10017933m.g Eutrema salsugineum
TPR.G13882 Trifolium pratense
TPR.G13888 Trifolium pratense
TWI79G1607 Tripterygium wilfordii
unitig_0.g210 Utricularia gibba
vmacro14640 Vaccinium macrocarpon
VMungo0540G0343 Vigna mungo
Zm00001eb336420 Zea mays

User provided reference genes

Program Settings