Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p03710 Brassica napus
A07p32110 Brassica napus
Aa31sc140G50 Aethionema arabicum
Actinidia31998 Actinidia chinensis
Actinidia32000 Actinidia chinensis
Ah.02g128170 Amaranthus hybridus
AL2G27020 Arabidopsis lyrata
Aqoxy3G00186 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.UW2YW6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WCM1NC Arachis hypogaea
AT1G68185 Arabidopsis thaliana
ATR0053G055 Amborella trichopoda
Atru.chr11.273 Acer truncatum
Atru.chr11.288 Acer truncatum
AUR62002792 Chenopodium quinoa
AUR62014103 Chenopodium quinoa
BcaB03g15404 Brassica carinata
BcaB03g16564 Brassica carinata
BcaB06g26972 Brassica carinata
BcaB07g33544 Brassica carinata
BcaC07g37113 Brassica carinata
BcaC07g37557 Brassica carinata
BcaC08g45988 Brassica carinata
BolC6t38884H Brassica oleracea
BolC6t38885H Brassica oleracea
BraA07t30839Z Brassica rapa
BraA07t30840Z Brassica rapa
C06p37830 Brassica napus
CAN.G99.9 Capsicum annuum
CANSAT01G2803 Cannabis sativa
CARHR060870 Cardamine hirsuta
Carub.0002s1467 Capsella rubella
Ca_11124_v3 Cicer arietinum L.
CBR_g17172 Chara braunii
Cc11_g09550 Coffea canephora
CDE06G0604 Ceratophyllum demersum
CDE07G1334 Ceratophyllum demersum
Ciclev10016584m.g Citrus clementina
CiPaw.05G243600 Carya illinoinensis
CiPaw.06G016000 Carya illinoinensis
ClCG05G022400 Citrullus lanatus
COL.COLO4_36793 Corchorus olitorius
Cpa.g.sc65.75 Carica papaya
CsaV3_5G006740 Cucumis sativus L.
CsaV3_5G034690 Cucumis sativus L.
CSS0027890 Camellia sinensis var. sinensis
DCAR_007270 Daucus carota
DCAR_030021 Daucus carota
DCAR_030977 Daucus carota
Dinv31583 Davidia involucrata
Duzib248G0017 Durio zibethinus
ECA246G1061 Erigeron canadensis
EL10Ac6g14282 Beta vulgaris
Eucgr.G02230 Eucalyptus grandis
FAN12G0878 Fragaria x ananassa
FAN12G2031 Fragaria x ananassa
FAN17G0635 Fragaria x ananassa
FAN22G1705 Fragaria x ananassa
FvH4_4g26560 Fragaria vesca
Glyma.10G269500 Glycine max
Glyma.20G121600 Glycine max
Gohir.A05G315000 Gossypium hirsutum
Gohir.D05G316500 Gossypium hirsutum
Gorai.009G338700 Gossypium raimondii
GSVIVG01011822001 Vitis vinifera
HanXRQChr15g0477811 Helianthus annuus
HanXRQChr17g0556611 Helianthus annuus
HanXRQChr17g0556631 Helianthus annuus
Haze_00665 Corylus avellana
HPP92_004850 Vanilla planifolia
HPP92_004876 Vanilla planifolia
Hund25025 Selenicereus undatus
Lalb_Chr10g0096361 Lupinus albus
Lalb_Chr17g0338791 Lupinus albus
Lj5g0005162 Lotus japonicus
Lj6P752T19 Lonicera japonica
Lsat_1_v5_gn_3_56960 Lactuca sativa
Lsat_1_v5_gn_6_106120 Lactuca sativa
Manes.06G064100 Manihot esculenta
Mapoly0066s0083 Marchantia polymorpha
MBI16_g14292_MAGBIO Magnolia biondii
MD13G1034500 Malus domestica
MD16G1036000 Malus domestica
Medtr1g109370 Medicago truncatula
MELO3C012283.2 Cucumis melo
Migut.E00381 Erythranthe guttata
MSTRG.2210 Avicennia marina
Nitab4.5_0001999g0020 Nicotiana tabacum
Nitab4.5_0012897g0010 Nicotiana tabacum
Nn4g23975 Nelumbo nucifera
Oeu014300.2 Olea europaea
Oeu027684.2 Olea europaea
Os01g0607300 Oryza sativa ssp. japonica
Peaxi162Scf00520g00114 Petunia axillaris
PGR119G2311 Punica granatum
PGSC0003DMG400010378 Solanum tuberosum
Phvul.007G033000 Phaseolus vulgaris
Potri.010G118900 Populus trichocarpa
Pp3c14_19600 Physcomitrium patens
Pp3c2_12120 Physcomitrium patens
Prupe.1G318000 Prunus persica
Psat6g223800 Pisum sativum
PSO017G1436 Papaver somniferum
PSO478G4574 Papaver somniferum
QL01p003354 Quercus lobata
RcHm_v2.0_Chr4g0434211 Rosa chinensis
Rhsim12G0086900 Rhododendron simsii
Sabra10G0089400 Salix brachista
Sc11g0003890 Simmondsia chinensis
Sed0026587 Sechium edule
Sed0027511 Sechium edule
SEGI_26799 Sequoiadendron giganteum
SGA_v2.0_scaffold170G38812 Striga asiatica
SHI16259 Sapria himalayana
SHI16262 Sapria himalayana
SHI22250 Sapria himalayana
Solyc03g013030.3 Solanum lycopersicum
Sopen03g020360 Solanum pennellii
Sp5g23190 Schrenkiella parvula
TAR629G3159 Trochodendron aralioides
THA.LOC104801669 Tarenaya hassleriana
Thecc.02G220100 Theobroma cacao
Thhalv10019127m.g Eutrema salsugineum
TPR.G4830 Trifolium pratense
TWI75G0343 Tripterygium wilfordii
unitig_52.g17127 Utricularia gibba
vmacro01410 Vaccinium macrocarpon
VMungo0720G1166 Vigna mungo
Zm00001eb357890 Zea mays

User provided reference genes

Program Settings