Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p44180 Brassica napus
Aa31LG2G8210 Aethionema arabicum
Actinidia12393 Actinidia chinensis
Actinidia36628 Actinidia chinensis
Ah.03g137410 Amaranthus hybridus
AL5G10780 Arabidopsis lyrata
Aqoxy3G00011 Aquilegia oxysepala
Aqoxy6G03070 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.ML4SS4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N2JTHJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q6KLHZ Arachis hypogaea
AT2G01680 Arabidopsis thaliana
ATR0753G008 Amborella trichopoda
Atru.chr11.928 Acer truncatum
Atru.chr11.929 Acer truncatum
AUR62014246 Chenopodium quinoa
AUR62038472 Chenopodium quinoa
BcaC06g31284 Brassica carinata
BcaC06g34134 Brassica carinata
BolC7t43768H Brassica oleracea
BraA06t27293Z Brassica rapa
C07p32320 Brassica napus
CAN.G282.133 Capsicum annuum
CANSAT01G3250 Cannabis sativa
CARHR144250 Cardamine hirsuta
Carub.0005s0063 Capsella rubella
Ca_12548_v3 Cicer arietinum L.
Ca_17257_v3 Cicer arietinum L.
Ca_17279_v3 Cicer arietinum L.
Cc11_g07180 Coffea canephora
CDE06G2827 Ceratophyllum demersum
CDE07G0847 Ceratophyllum demersum
Cfa015022 Carpinus fangiana
Ciclev10014855m.g Citrus clementina
CiPaw.05G189300 Carya illinoinensis
CiPaw.06G051600 Carya illinoinensis
ClCG01G006560 Citrullus lanatus
COL.COLO4_16585 Corchorus olitorius
Cpa.g.sc2.198 Carica papaya
CsaV3_5G028170 Cucumis sativus L.
CSS0019353 Camellia sinensis var. sinensis
DCAR_030269 Daucus carota
DCAR_032282 Daucus carota
Dinv07732 Davidia involucrata
Duzib251G0534 Durio zibethinus
Duzib268G0441 Durio zibethinus
ECA233G0574 Erigeron canadensis
EL10Ac6g14115 Beta vulgaris
Eucgr.G02108 Eucalyptus grandis
FAN07G1725 Fragaria x ananassa
FAN12G2722 Fragaria x ananassa
FAN17G1531 Fragaria x ananassa
FvH4_4g33630 Fragaria vesca
Glyma.02G084900 Glycine max
Glyma.05G238600 Glycine max
Glyma.07G169500 Glycine max
Glyma.08G045700 Glycine max
Gohir.A01G147100 Gossypium hirsutum
Gohir.A04G142600 Gossypium hirsutum
Gohir.D04G185900 Gossypium hirsutum
Gorai.012G182300 Gossypium raimondii
GSVIVG01011665001 Vitis vinifera
HanXRQChr08g0212481 Helianthus annuus
HanXRQChr12g0363241 Helianthus annuus
Haze_10883 Corylus avellana
Hma1.2p1_0705F.1_g206970 Hydrangea macrophylla
HPP92_020302 Vanilla planifolia
Hund24925 Selenicereus undatus
Lalb_Chr09g0330911 Lupinus albus
Lalb_Chr10g0095741 Lupinus albus
Lalb_Chr16g0387541 Lupinus albus
Lj2g0022141 Lotus japonicus
Lj4g0012485 Lotus japonicus
Lj6A738T64 Lonicera japonica
Lsat_1_v5_gn_8_46240 Lactuca sativa
Manes.15G134000 Manihot esculenta
MD13G1020700 Malus domestica
MD16G1019100 Malus domestica
Medtr1g032100 Medicago truncatula
Medtr8g105260 Medicago truncatula
MELO3C005252.2 Cucumis melo
Migut.E00479 Erythranthe guttata
MSTRG.13625 Avicennia marina
Nitab4.5_0000198g0170 Nicotiana tabacum
Nitab4.5_0005571g0020 Nicotiana tabacum
Nn3g18358 Nelumbo nucifera
Nn4g24360 Nelumbo nucifera
Oeu023862.1 Olea europaea
Oeu031608.1 Olea europaea
Os02g0735700 Oryza sativa ssp. japonica
Peaxi162Scf00655g00122 Petunia axillaris
PGR142G1825 Punica granatum
PGSC0003DMG400019975 Solanum tuberosum
Phvul.002G321000 Phaseolus vulgaris
Phvul.003G019500 Phaseolus vulgaris
Potri.008G134500 Populus trichocarpa
Potri.010G106800 Populus trichocarpa
Prupe.1G333000 Prunus persica
Psat6g046240 Pisum sativum
Psat7g008040 Pisum sativum
PSO017G5753 Papaver somniferum
PSO478G0178 Papaver somniferum
QL03p035752 Quercus lobata
RcHm_v2.0_Chr4g0443091 Rosa chinensis
Sabra10G0078000 Salix brachista
SalBow2G0364 Salvia bowleyana
SalBow2G2576 Salvia bowleyana
Sc14g0006840 Simmondsia chinensis
Sed0010096 Sechium edule
Sed0012819 Sechium edule
SGA_v2.0_scaffold23G10220 Striga asiatica
SHI04319 Sapria himalayana
Solyc01g005340.3 Solanum lycopersicum
Sopen01g001360 Solanum pennellii
Sp2g13140 Schrenkiella parvula
TAR371G0605 Trochodendron aralioides
TAR629G1112 Trochodendron aralioides
THA.LOC104805939 Tarenaya hassleriana
Thecc.02G292200 Theobroma cacao
Thhalv10003970m.g Eutrema salsugineum
TPR.G36927 Trifolium pratense
TPR.G7305 Trifolium pratense
TWI74G0370 Tripterygium wilfordii
vmacro10691 Vaccinium macrocarpon
VMungo0251G1416 Vigna mungo
VMungo1215G3372 Vigna mungo
Zm00001eb190350 Zea mays
Zm00001eb253830 Zea mays
Zm00001eb422760 Zea mays

User provided reference genes

Program Settings