Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p20200 Brassica napus
A02p33010 Brassica napus
A04p19270 Brassica napus
A07p41260 Brassica napus
Aa31LG4G5960 Aethionema arabicum
Actinidia15419 Actinidia chinensis
Actinidia16984 Actinidia chinensis
AL2G35720 Arabidopsis lyrata
Aqoxy5G01785 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea
AT1G75730 Arabidopsis thaliana
ATR0152G004 Amborella trichopoda
Atru.chr13.296 Acer truncatum
Atru.chr13.297 Acer truncatum
Atru.chr13.298 Acer truncatum
AUR62033831 Chenopodium quinoa
AUR62035752 Chenopodium quinoa
BcaB05g24937 Brassica carinata
BcaC03g15614 Brassica carinata
BcaC03g15618 Brassica carinata
BcaC08g47047 Brassica carinata
BcaC08g47058 Brassica carinata
BolC2t09331H Brassica oleracea
BolC6t40007H Brassica oleracea
BraA02t07054Z Brassica rapa
BraA07t31661Z Brassica rapa
C02p33740 Brassica napus
C06p49680 Brassica napus
CAN.G311.27 Capsicum annuum
CANSAT25G3202 Cannabis sativa
CARHR069140 Cardamine hirsuta
Carub.0002s2258 Capsella rubella
Ca_13427_v3 Cicer arietinum L.
Ca_15483_v3 Cicer arietinum L.
Cc10_g01700 Coffea canephora
Cfa013945 Carpinus fangiana
Ciclev10000382m.g Citrus clementina
CiPaw.07G150400 Carya illinoinensis
CiPaw.08G066200 Carya illinoinensis
COL.COLO4_26152 Corchorus olitorius
Cpa.g.sc26.38 Carica papaya
CSS0010969 Camellia sinensis var. sinensis
CSS0021578 Camellia sinensis var. sinensis
CSS0024961 Camellia sinensis var. sinensis
CSS0029124 Camellia sinensis var. sinensis
CSS0034917 Camellia sinensis var. sinensis
DCAR_013867 Daucus carota
Dinv31841 Davidia involucrata
Dinv39514 Davidia involucrata
Duzib041G0240 Durio zibethinus
Duzib041G0283 Durio zibethinus
Duzib093G0923 Durio zibethinus
Duzib116G0067 Durio zibethinus
Eucgr.F00598 Eucalyptus grandis
FAN15G3724 Fragaria x ananassa
FAN20G0665 Fragaria x ananassa
FAN27G0575 Fragaria x ananassa
FvH4_2g38520 Fragaria vesca
Glyma.04G024500 Glycine max
Glyma.06G024600 Glycine max
Glyma.14G219000 Glycine max
Glyma.17G258000 Glycine max
GSVIVG01001494001 Vitis vinifera
GSVIVG01001500001 Vitis vinifera
GSVIVG01001513001 Vitis vinifera
GSVIVG01003271001 Vitis vinifera
GSVIVG01003275001 Vitis vinifera
GSVIVG01009901001 Vitis vinifera
Haze_22630 Corylus avellana
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla
Hund05208 Selenicereus undatus
Lalb_Chr08g0246161 Lupinus albus
Lalb_Chr11g0061931 Lupinus albus
Lj1g0027004 Lotus japonicus
Lj4A25T50 Lonicera japonica
Lj5g0002996 Lotus japonicus
Manes.05G147800 Manihot esculenta
Manes.18G013740 Manihot esculenta
MBI05_g30742_MAGBIO Magnolia biondii
MD08G1013300 Malus domestica
MD15G1012700 Malus domestica
Medtr1g025180 Medicago truncatula
Medtr3g113840 Medicago truncatula
Migut.C00828 Erythranthe guttata
MSTRG.25246 Avicennia marina
Nitab4.5_0002561g0040 Nicotiana tabacum
Nn2g11993 Nelumbo nucifera
Nn5g30152 Nelumbo nucifera
Oeu020868.1 Olea europaea
Peaxi162Scf00438g00718 Petunia axillaris
PGR031G0679 Punica granatum
PGSC0003DMG400009935 Solanum tuberosum
Phvul.001G006800 Phaseolus vulgaris
Phvul.009G016700 Phaseolus vulgaris
Potri.002G022800 Populus trichocarpa
Potri.005G238800 Populus trichocarpa
Prupe.1G365800 Prunus persica
Psat5g013200 Pisum sativum
Psat6g003040 Pisum sativum
PSO170G0005 Papaver somniferum
PSO700G0360 Papaver somniferum
QL02p011519 Quercus lobata
RcHm_v2.0_Chr6g0302801 Rosa chinensis
Rhsim07G0247100 Rhododendron simsii
Sabra02G0018600 Salix brachista
Sabra05G0184500 Salix brachista
SalBow7G4715 Salvia bowleyana
Sc15g0005020 Simmondsia chinensis
SGA_v2.0_scaffold11G05915 Striga asiatica
SGA_v2.0_scaffold92G28233 Striga asiatica
Solyc04g081420.4 Solanum lycopersicum
Sopen04g035030 Solanum pennellii
Sp5g30850 Schrenkiella parvula
TAR381G0505 Trochodendron aralioides
TAR381G0696 Trochodendron aralioides
THA.LOC104814031 Tarenaya hassleriana
Thecc.08G043900 Theobroma cacao
Thhalv10018322m.g Eutrema salsugineum
TPR.G26373 Trifolium pratense
TPR.G31883 Trifolium pratense
TPR.G34540 Trifolium pratense
TWI12G0183 Tripterygium wilfordii
TWI36G1616 Tripterygium wilfordii
TWI56G0017 Tripterygium wilfordii
vmacro04350 Vaccinium macrocarpon
vmacro21724 Vaccinium macrocarpon
VMungo0647G1459 Vigna mungo
VMungo1309G2950 Vigna mungo

User provided reference genes

Program Settings