Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p20650 Brassica napus
A05p20720 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_117.291 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5516 Anthoceros agrestis
Actinidia17824 Actinidia chinensis
AL1G56310 Arabidopsis lyrata
Aqoxy5G01675 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CA4G6V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IUSJ9T Arachis hypogaea
AT1G49350 Arabidopsis thaliana
ATR0733G150 Amborella trichopoda
Atru.chr5.2957 Acer truncatum
AUR62011353 Chenopodium quinoa
AUR62016709 Chenopodium quinoa
BcaB02g11057 Brassica carinata
BcaC05g27500 Brassica carinata
BcaC05g27521 Brassica carinata
BolC5t32198H Brassica oleracea
BolC5t32220H Brassica oleracea
BraA05t20973Z Brassica rapa
BraA05t20979Z Brassica rapa
C05p34650 Brassica napus
C05p34970 Brassica napus
CAN.G149.23 Capsicum annuum
CAN.G322.116 Capsicum annuum
CARHR039340 Cardamine hirsuta
CARHR039360 Cardamine hirsuta
CARHR039370 Cardamine hirsuta
Carub.0001s3853 Capsella rubella
Ca_18760_v3 Cicer arietinum L.
CBR_g27891 Chara braunii
Cc02_g17800 Coffea canephora
CDE02G3889 Ceratophyllum demersum
Cfa005027 Carpinus fangiana
Ciclev10003801m.g Citrus clementina
Ciclev10013569m.g Citrus clementina
Ciclev10018182m.g Citrus clementina
Ciclev10029888m.g Citrus clementina
CiPaw.06G137300 Carya illinoinensis
ClCG02G005220 Citrullus lanatus
COL.COLO4_32449 Corchorus olitorius
Cpa.g.sc62.118 Carica papaya
Cre17.g701100 Chlamydomonas reinhardtii
CsaV3_7G023300 Cucumis sativus L.
CSS0013374 Camellia sinensis var. sinensis
DCAR_003638 Daucus carota
Dinv42087 Davidia involucrata
Duzib248G0238 Durio zibethinus
ECA236G0345 Erigeron canadensis
EL10Ac9g21750 Beta vulgaris
Eucgr.G00462 Eucalyptus grandis
Eucgr.G00468 Eucalyptus grandis
Eucgr.G01892 Eucalyptus grandis
Eucgr.G01900 Eucalyptus grandis
FAN15G1485 Fragaria x ananassa
FAN20G0571 Fragaria x ananassa
FAN24G3462 Fragaria x ananassa
FAN27G2671 Fragaria x ananassa
FvH4_2g08380 Fragaria vesca
Glyma.20G019800 Glycine max
Gohir.A04G104400 Gossypium hirsutum
Gohir.D04G144200 Gossypium hirsutum
Gohir.D04G144225 Gossypium hirsutum
Gorai.008G153200 Gossypium raimondii
Gorai.012G129800 Gossypium raimondii
Gorai.012G129900 Gossypium raimondii
GSVIVG01024153001 Vitis vinifera
HanXRQChr16g0504971 Helianthus annuus
Hma1.2p1_0066F.1_g036670 Hydrangea macrophylla
Hund00288 Selenicereus undatus
Lalb_Chr16g0385211 Lupinus albus
Lj4g0018405 Lotus japonicus
Lj9A367G52 Lonicera japonica
Lj9A367G53 Lonicera japonica
Lsat_1_v5_gn_7_89660 Lactuca sativa
Manes.17G099400 Manihot esculenta
Mapoly0044s0080 Marchantia polymorpha
MBI16_g17455_MAGBIO Magnolia biondii
MCO11G507 Micromonas commoda
MD10G1080400 Malus domestica
Medtr4g084100 Medicago truncatula
MELO3C012560.2 Cucumis melo
Migut.N01227 Erythranthe guttata
MSTRG.20102 Avicennia marina
Nitab4.5_0000443g0010 Nicotiana tabacum
Nitab4.5_0000776g0050 Nicotiana tabacum
Nitab4.5_0001794g0010 Nicotiana tabacum
Nitab4.5_0008989g0030 Nicotiana tabacum
Nn1g05068 Nelumbo nucifera
Oeu014335.1 Olea europaea
Os05g0185700 Oryza sativa ssp. japonica
Peaxi162Scf00016g00941 Petunia axillaris
PGSC0003DMG400025190 Solanum tuberosum
Phvul.007G233200 Phaseolus vulgaris
Potri.004G151600 Populus trichocarpa
Potri.004G152100 Populus trichocarpa
Pp3c15_14160 Physcomitrium patens
PRCOL_00000481 Prasinoderma coloniale
Prupe.8G101700 Prunus persica
Psat3g133040 Pisum sativum
QL04p035577 Quercus lobata
QL11p042848 Quercus lobata
QL11p051325 Quercus lobata
RcHm_v2.0_Chr6g0263461 Rosa chinensis
Rhsim05G0076000 Rhododendron simsii
Sabra04G0100900 Salix brachista
SalBow3G0191 Salvia bowleyana
Sc14g0001790 Simmondsia chinensis
Sc14g0001900 Simmondsia chinensis
Sc14g0001910 Simmondsia chinensis
Sed0023974 Sechium edule
SEGI_31956 Sequoiadendron giganteum
SGA_v2.0_scaffold44G16630 Striga asiatica
SGA_v2.0_scaffold55G19804 Striga asiatica
Solyc01g109450.3 Solanum lycopersicum
Sopen01g051640 Solanum pennellii
Sp1g36210 Schrenkiella parvula
TAR371G0586 Trochodendron aralioides
TAR371G0927 Trochodendron aralioides
TAR628G1003 Trochodendron aralioides
THA.LOC104804910 Tarenaya hassleriana
Thecc.02G123100 Theobroma cacao
Thhalv10011559m.g Eutrema salsugineum
TPR.G20990 Trifolium pratense
TWI31G0066 Tripterygium wilfordii
unitig_22.g6840 Utricularia gibba
vmacro19435 Vaccinium macrocarpon
VMungo0720G1659 Vigna mungo
Zm00001eb346550 Zea mays

User provided reference genes

Program Settings