Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p40850 Brassica napus
A06p37950 Brassica napus
Aa31LG11G8710 Aethionema arabicum
Aa31LG5G14970 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.503 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3126 Anthoceros agrestis
Actinidia06785 Actinidia chinensis
Ah.06g191950 Amaranthus hybridus
AL3G14570 Arabidopsis lyrata
AL6G40560 Arabidopsis lyrata
Aqoxy5G00261 Aquilegia oxysepala
AT3G04550 Arabidopsis thaliana
AT5G28500 Arabidopsis thaliana
ATR0680G103 Amborella trichopoda
Atru.chr2.897 Acer truncatum
AUR62004874 Chenopodium quinoa
AUR62037607 Chenopodium quinoa
BcaB04g21366 Brassica carinata
BcaC09g47795 Brassica carinata
BcaNung01728 Brassica carinata
BcaNung02093 Brassica carinata
BNapus_Darmor_BZH_scaffold_78p00860 Brassica napus
BolC1t05743H Brassica oleracea
BolC7t44567H Brassica oleracea
BraA01t04521Z Brassica rapa
BraA06t26711Z Brassica rapa
C07p40330 Brassica napus
CAN.G582.15 Capsicum annuum
CANSAT54G2996 Cannabis sativa
CARHR078740 Cardamine hirsuta
CARHR185150 Cardamine hirsuta
Carub.0003s0370 Capsella rubella
Carub.0006s2578 Capsella rubella
Ca_10007_v3 Cicer arietinum L.
CBR_g29314 Chara braunii
CDE05G0955 Ceratophyllum demersum
CDE08G1514 Ceratophyllum demersum
Cfa006329 Carpinus fangiana
Ciclev10027647m.g Citrus clementina
CiPaw.07G078300 Carya illinoinensis
ClCG06G009410 Citrullus lanatus
Cpa.g.sc162.21 Carica papaya
Cpa.g.sc162.24 Carica papaya
Cre06.g308450 Chlamydomonas reinhardtii
CsaV3_1G045560 Cucumis sativus L.
CSS0036761 Camellia sinensis var. sinensis
DCAR_002178 Daucus carota
DCAR_030973 Daucus carota
Dinv06988 Davidia involucrata
Duzib128G1627 Durio zibethinus
ECA238G2300 Erigeron canadensis
EL10Ac4g09057 Beta vulgaris
Eucgr.H04253 Eucalyptus grandis
FAN02G1274 Fragaria x ananassa
FAN05G2712 Fragaria x ananassa
FAN05G4153 Fragaria x ananassa
FAN09G4845 Fragaria x ananassa
FAN14G1966 Fragaria x ananassa
FAN14G5007 Fragaria x ananassa
FvH4_6g02280 Fragaria vesca
Glyma.10G166900 Glycine max
Glyma.20G222200 Glycine max
Gohir.A13G103800 Gossypium hirsutum
Gohir.D13G107000 Gossypium hirsutum
Gorai.013G120100 Gossypium raimondii
HanXRQChr07g0201901 Helianthus annuus
HanXRQChr14g0458931 Helianthus annuus
Haze_04459 Corylus avellana
Hma1.2p1_1227F.1_g268570 Hydrangea macrophylla
HPP92_025973 Vanilla planifolia
Lalb_Chr06g0168341 Lupinus albus
Lalb_Chr18g0044051 Lupinus albus
Lj2C39T18 Lonicera japonica
Lj5g0004576 Lotus japonicus
Lsat_1_v5_gn_2_107721 Lactuca sativa
Manes.09G149100 Manihot esculenta
Mapoly0001s0431 Marchantia polymorpha
Mapoly4350s0001 Marchantia polymorpha
MBI18_g32212_MAGBIO Magnolia biondii
MBI18_g37358_MAGBIO Magnolia biondii
MCO04G553 Micromonas commoda
MD04G1228600 Malus domestica
MD12G1245900 Malus domestica
Medtr1g079870 Medicago truncatula
MELO3C024664.2 Cucumis melo
Migut.F00810 Erythranthe guttata
Nitab4.5_0000856g0150 Nicotiana tabacum
Nitab4.5_0010345g0010 Nicotiana tabacum
Nn1g02711 Nelumbo nucifera
Oeu029038.1 Olea europaea
Os10g0445600 Oryza sativa ssp. japonica
Peaxi162Scf00120g00021 Petunia axillaris
PGR004G0430 Punica granatum
PGSC0003DMG400028668 Solanum tuberosum
Phvul.L001763 Phaseolus vulgaris
Potri.013G044900 Populus trichocarpa
Pp3c16_6440 Physcomitrium patens
Pp3c18_4320 Physcomitrium patens
PRCOL_00003529 Prasinoderma coloniale
Prupe.6G348600 Prunus persica
Psat6g143080 Pisum sativum
PSO210G1007 Papaver somniferum
PSO832G3978 Papaver somniferum
QL03p031869 Quercus lobata
QL08p015782 Quercus lobata
RcHm_v2.0_Chr3g0450031 Rosa chinensis
Rhsim05G0175300 Rhododendron simsii
Sabra13G0041300 Salix brachista
SalBow3G3408 Salvia bowleyana
Sc06g0004060 Simmondsia chinensis
Sed0012882 Sechium edule
SEGI_10874 Sequoiadendron giganteum
SGA_v2.0_scaffold210G42065 Striga asiatica
SMO137G0122 Selaginella moellendorffii
Solyc11g006060.2 Solanum lycopersicum
Sopen11g002000 Solanum pennellii
Sp2g20170 Schrenkiella parvula
Sp3g03390 Schrenkiella parvula
TAR633G0272 Trochodendron aralioides
THA.LOC104799246 Tarenaya hassleriana
Thecc.05G275300 Theobroma cacao
Thhalv10004236m.g Eutrema salsugineum
Thhalv10020727m.g Eutrema salsugineum
TPR.G10266 Trifolium pratense
TWI36G0216 Tripterygium wilfordii
unitig_748.g8683 Utricularia gibba
vmacro20002 Vaccinium macrocarpon
VMungo0720G3050 Vigna mungo
Zm00001eb066000 Zea mays

User provided reference genes

Program Settings