Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p06220 Brassica napus
Aa31LG1G14310 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4586 Anthoceros agrestis
Actinidia26362 Actinidia chinensis
Ah.14g079080 Amaranthus hybridus
AL6G31940 Arabidopsis lyrata
Aqoxy3G00606 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.65V40T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9TXC7I Arachis hypogaea
AT5G20380 Arabidopsis thaliana
ATR0767G237 Amborella trichopoda
Atru.chr7.2001 Acer truncatum
Atru.chr7.2002 Acer truncatum
AUR62013262 Chenopodium quinoa
BcaB01g04789 Brassica carinata
BcaB05g22849 Brassica carinata
BcaC03g13761 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p01620 Brassica napus
BolC2t07039H Brassica oleracea
BraA02t05571Z Brassica rapa
CAN.G467.10 Capsicum annuum
CANSAT11G1077 Cannabis sativa
CARHR192460 Cardamine hirsuta
Carub.0006s1877 Capsella rubella
Ca_21641_v3 Cicer arietinum L.
CBR_g32555 Chara braunii
Cc00_g27330 Coffea canephora
Cc00_g32200 Coffea canephora
Cc06_g07720 Coffea canephora
CDE05G1074 Ceratophyllum demersum
CDE05G2885 Ceratophyllum demersum
Cfa002272 Carpinus fangiana
Ciclev10007933m.g Citrus clementina
CiPaw.04G177100 Carya illinoinensis
ClCG11G003440 Citrullus lanatus
COL.COLO4_33376 Corchorus olitorius
Cpa.g.sc277.4 Carica papaya
Cre09.g396950 Chlamydomonas reinhardtii
Cre16.g648300 Chlamydomonas reinhardtii
Cre16.g663600 Chlamydomonas reinhardtii
CsaV3_2G003310 Cucumis sativus L.
CSS0049656 Camellia sinensis var. sinensis
DCAR_020894 Daucus carota
Dinv36452 Davidia involucrata
ECA234G1709 Erigeron canadensis
EL10Ac8g18764 Beta vulgaris
Eucgr.C00489 Eucalyptus grandis
FAN19G1220 Fragaria x ananassa
FAN23G0834 Fragaria x ananassa
FAN26G1130 Fragaria x ananassa
FAN28G1430 Fragaria x ananassa
FvH4_1g02110 Fragaria vesca
Glyma.13G162900 Glycine max
Glyma.17G108300 Glycine max
Gohir.A05G013200 Gossypium hirsutum
Gohir.D05G014300 Gossypium hirsutum
Gorai.009G014300 Gossypium raimondii
GSVIVG01012848001 Vitis vinifera
GSVIVG01012850001 Vitis vinifera
HanXRQChr12g0357151 Helianthus annuus
HanXRQChr15g0484911 Helianthus annuus
Haze_25454 Corylus avellana
Hma1.2p1_0343F.1_g130810 Hydrangea macrophylla
HPP92_021997 Vanilla planifolia
HPP92_022038 Vanilla planifolia
HPP92_022040 Vanilla planifolia
Hund09304 Selenicereus undatus
Hund09306 Selenicereus undatus
Lalb_Chr07g0179361 Lupinus albus
Lj4g0021646 Lotus japonicus
Lj9A703G35 Lonicera japonica
Lsat_1_v5_gn_5_93040 Lactuca sativa
Manes.06G044700 Manihot esculenta
Mapoly0135s0018 Marchantia polymorpha
MBI14_g31958_MAGBIO Magnolia biondii
MCO07G358 Micromonas commoda
MCO09G593 Micromonas commoda
MD02G1019100 Malus domestica
MD02G1019200 Malus domestica
MD15G1162900 Malus domestica
Medtr4g116030 Medicago truncatula
MELO3C004476.2 Cucumis melo
Migut.K00401 Erythranthe guttata
MSTRG.26330 Avicennia marina
Nitab4.5_0000704g0100 Nicotiana tabacum
Nitab4.5_0000704g0110 Nicotiana tabacum
Nitab4.5_0003587g0050 Nicotiana tabacum
Nn8g39624 Nelumbo nucifera
Oeu013936.1 Olea europaea
Oeu053519.2 Olea europaea
Os09g0556400 Oryza sativa ssp. japonica
Peaxi162Scf00088g00819 Petunia axillaris
PGR142G1011 Punica granatum
PGSC0003DMG400030684 Solanum tuberosum
Phvul.003G171700 Phaseolus vulgaris
Potri.006G062300 Populus trichocarpa
Potri.018G121600 Populus trichocarpa
Pp3c4_4410 Physcomitrium patens
PRCOL_00001475 Prasinoderma coloniale
PRCOL_00004924 Prasinoderma coloniale
Prupe.7G251900 Prunus persica
Psat4g035120 Pisum sativum
PSO017G0326 Papaver somniferum
PSO170G6862 Papaver somniferum
QL02p090592 Quercus lobata
RcHm_v2.0_Chr2g0087161 Rosa chinensis
Rhsim03G0252700 Rhododendron simsii
Sabra06G0044900 Salix brachista
Sabra18G0102000 Salix brachista
SalBow1G2698 Salvia bowleyana
Sc08g0006070 Simmondsia chinensis
Sed0027250 Sechium edule
SEGI_14112 Sequoiadendron giganteum
SGA_v2.0_scaffold183G39903 Striga asiatica
Solyc07g007560.3 Solanum lycopersicum
Sopen07g003560 Solanum pennellii
Sp6g24040 Schrenkiella parvula
TAR625G1481 Trochodendron aralioides
THA.LOC104815095 Tarenaya hassleriana
Thecc.09G136600 Theobroma cacao
Thhalv10013250m.g Eutrema salsugineum
TPR.G7977 Trifolium pratense
TWI34G0845 Tripterygium wilfordii
unitig_899.g15011 Utricularia gibba
unitig_899.g15012 Utricularia gibba
vmacro06165 Vaccinium macrocarpon
vmacro22984 Vaccinium macrocarpon
VMungo1215G3343 Vigna mungo
Zm00001eb320540 Zea mays

User provided reference genes

Program Settings