Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p49100 Brassica napus
Aa31LG10G11030 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2815 Anthoceros agrestis
Actinidia17483 Actinidia chinensis
Actinidia32694 Actinidia chinensis
Actinidia38161 Actinidia chinensis
Ah.09g227010 Amaranthus hybridus
Ah.09g227020 Amaranthus hybridus
AL5G37440 Arabidopsis lyrata
Aqoxy4G02394 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0DQ71P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4YWE6A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7815EC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.79CRDV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LVY3P8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QVF5JZ Arachis hypogaea
AT3G56120 Arabidopsis thaliana
ATR0605G072 Amborella trichopoda
AUR62011030 Chenopodium quinoa
AUR62033403 Chenopodium quinoa
BcaB01g00029 Brassica carinata
BcaC07g39927 Brassica carinata
BolC4t25154H Brassica oleracea
BolC8t50763H Brassica oleracea
BraA09t40362Z Brassica rapa
C03p23240 Brassica napus
C04p36410 Brassica napus
C06p44190 Brassica napus
C08p31420 Brassica napus
CAN.G444.6 Capsicum annuum
CANSAT56G1449 Cannabis sativa
CARHR166270 Cardamine hirsuta
Carub.0005s2287 Capsella rubella
Ca_02541_v3 Cicer arietinum L.
CBR_g154 Chara braunii
Cc10_g11950 Coffea canephora
CDE05G1108 Ceratophyllum demersum
Cfa024400 Carpinus fangiana
CiPaw.03G235200 Carya illinoinensis
ClCG11G002640 Citrullus lanatus
COL.COLO4_34935 Corchorus olitorius
Cpa.g.sc23.142 Carica papaya
Cpa.g.sc23.143 Carica papaya
Cre16.g672041 Chlamydomonas reinhardtii
CsaV3_2G002470 Cucumis sativus L.
CSS0035000 Camellia sinensis var. sinensis
CSS0036442 Camellia sinensis var. sinensis
CSS0041277 Camellia sinensis var. sinensis
DCAR_016972 Daucus carota
DCAR_028731 Daucus carota
Duzib168G1197 Durio zibethinus
Duzib187G1530 Durio zibethinus
ECA234G2455 Erigeron canadensis
EL10Ac8g18544 Beta vulgaris
Eucgr.C01077 Eucalyptus grandis
FAN19G1865 Fragaria x ananassa
FAN23G1201 Fragaria x ananassa
FAN26G0906 Fragaria x ananassa
FAN26G3367 Fragaria x ananassa
FvH4_1g05380 Fragaria vesca
Glyma.05G012700 Glycine max
Glyma.17G120833 Glycine max
Gohir.A06G060550 Gossypium hirsutum
Gohir.D06G058900 Gossypium hirsutum
HanXRQChr10g0317371 Helianthus annuus
HanXRQChr12g0355841 Helianthus annuus
Haze_25681 Corylus avellana
Hma1.2p1_1968F.1_g309470 Hydrangea macrophylla
Hma1.2p1_1968F.1_g309480 Hydrangea macrophylla
HPP92_026033 Vanilla planifolia
Hund14754 Selenicereus undatus
Hund26118 Selenicereus undatus
Lalb_Chr08g0235011 Lupinus albus
Lalb_Chr21g0316611 Lupinus albus
Lj4g0022349 Lotus japonicus
Lj7A641G78 Lonicera japonica
Lj7A641G79 Lonicera japonica
Lsat_1_v5_gn_5_99861 Lactuca sativa
Manes.03G068300 Manihot esculenta
Manes.16G065000 Manihot esculenta
Mapoly0022s0148 Marchantia polymorpha
MBI01_g20396_MAGBIO Magnolia biondii
MCO08G012 Micromonas commoda
MD02G1062400 Malus domestica
Medtr4g112015 Medicago truncatula
MELO3C004542.2 Cucumis melo
Migut.D02058 Erythranthe guttata
Nitab4.5_0000005g0480 Nicotiana tabacum
Nitab4.5_0000066g0020 Nicotiana tabacum
Nn7g36037 Nelumbo nucifera
Os02g0606300 Oryza sativa ssp. japonica
Peaxi162Scf00560g00619 Petunia axillaris
PGR142G2078 Punica granatum
PGSC0003DMG401015580 Solanum tuberosum
PGSC0003DMG402015580 Solanum tuberosum
Phvul.003G176601 Phaseolus vulgaris
Potri.018G072200 Populus trichocarpa
Pp3c17_17170 Physcomitrium patens
PRCOL_00004046 Prasinoderma coloniale
Psat4g043160 Pisum sativum
Psat4g050320 Pisum sativum
Psat4g050360 Pisum sativum
PSO170G5904 Papaver somniferum
PSO210G4513 Papaver somniferum
QL02p086119 Quercus lobata
RcHm_v2.0_Chr2g0091071 Rosa chinensis
Rhsim03G0244900 Rhododendron simsii
Sabra18G0064400 Salix brachista
SalBow1G1951 Salvia bowleyana
SalBow7G1800 Salvia bowleyana
Sc18g0001020 Simmondsia chinensis
Sed0019430 Sechium edule
SEGI_20865 Sequoiadendron giganteum
SEGI_24830 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00550 Striga asiatica
SGA_v2.0_scaffold42G16128 Striga asiatica
SHI02609 Sapria himalayana
SMO141G0090 Selaginella moellendorffii
Solyc05g006200.4 Solanum lycopersicum
Sopen05g002210 Solanum pennellii
Sp5g06410 Schrenkiella parvula
TAR383G0369 Trochodendron aralioides
THA.LOC104811104 Tarenaya hassleriana
Thecc.09G114900 Theobroma cacao
Thhalv10005971m.g Eutrema salsugineum
TPR.G26750 Trifolium pratense
TWI34G1303 Tripterygium wilfordii
unitig_46.g18492 Utricularia gibba
vmacro06194 Vaccinium macrocarpon
Zm00001eb184100 Zea mays

User provided reference genes

Program Settings