Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia13954 Actinidia chinensis
Ah.14g079050 Amaranthus hybridus
Aqoxy7G03599 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4JVY84 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.76U6XQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R34WHD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SG63NI Arachis hypogaea
Atru.chr7.2009 Acer truncatum
CAN.G467.3 Capsicum annuum
Cc06_g07690 Coffea canephora
Cc08_g00370 Coffea canephora
Cfa002265 Carpinus fangiana
CiPaw.07G225700 Carya illinoinensis
CiPaw.08G009200 Carya illinoinensis
ClCG11G003470 Citrullus lanatus
ClCG11G003490 Citrullus lanatus
COL.COLO4_18893 Corchorus olitorius
Cpa.g.sc187.8 Carica papaya
Cpa.g.sc46.64 Carica papaya
CsaV3_2G003340 Cucumis sativus L.
CsaV3_2G003360 Cucumis sativus L.
CSS0041528 Camellia sinensis var. sinensis
Dinv15868 Davidia involucrata
Dinv18195 Davidia involucrata
Dinv24981 Davidia involucrata
Dinv38142 Davidia involucrata
Duzib150G0960 Durio zibethinus
Duzib150G1536 Durio zibethinus
Duzib168G0348 Durio zibethinus
Duzib168G1698 Durio zibethinus
Duzib187G0069 Durio zibethinus
ECA234G1017 Erigeron canadensis
EL10Ac8g18758 Beta vulgaris
FAN15G1890 Fragaria x ananassa
FAN19G0448 Fragaria x ananassa
FAN20G3098 Fragaria x ananassa
FAN23G0205 Fragaria x ananassa
FAN24G2458 Fragaria x ananassa
FAN26G1249 Fragaria x ananassa
FAN27G1313 Fragaria x ananassa
FAN28G1178 Fragaria x ananassa
FvH4_1g02080 Fragaria vesca
FvH4_2g28660 Fragaria vesca
Glyma.13G163100 Glycine max
Glyma.13G163302 Glycine max
Glyma.17G107600 Glycine max
Glyma.17G107800 Glycine max
Gohir.A05G013100 Gossypium hirsutum
Gohir.A07G029800 Gossypium hirsutum
Gohir.A13G181000 Gossypium hirsutum
Gohir.D05G014200 Gossypium hirsutum
Gohir.D05G058501 Gossypium hirsutum
Gohir.D07G033600 Gossypium hirsutum
Gohir.D13G188800 Gossypium hirsutum
Gorai.001G035200 Gossypium raimondii
Gorai.009G014200 Gossypium raimondii
Gorai.009G059600 Gossypium raimondii
Gorai.013G214200 Gossypium raimondii
GSVIVG01012854001 Vitis vinifera
GSVIVG01017457001 Vitis vinifera
GSVIVG01035947001 Vitis vinifera
HanXRQChr06g0180411 Helianthus annuus
HanXRQChr10g0314161 Helianthus annuus
HanXRQChr12g0357121 Helianthus annuus
Haze_25450 Corylus avellana
Hma1.2p1_0343F.1_g130780 Hydrangea macrophylla
Hund09307 Selenicereus undatus
Hund21593 Selenicereus undatus
Lj9A703T45 Lonicera japonica
Manes.04G109000 Manihot esculenta
Manes.06G044400 Manihot esculenta
Manes.14G119100 Manihot esculenta
MD02G1018600 Malus domestica
MD08G1151900 Malus domestica
MD15G1129000 Malus domestica
MD15G1162600 Malus domestica
Medtr4g116080 Medicago truncatula
MELO3C004479.2 Cucumis melo
MELO3C004482.2 Cucumis melo
Migut.J01244 Erythranthe guttata
Nitab4.5_0007621g0020 Nicotiana tabacum
Nitab4.5_0008536g0060 Nicotiana tabacum
Nn8g39643 Nelumbo nucifera
Oeu036480.1 Olea europaea
Oeu055936.1 Olea europaea
Oeu058579.1 Olea europaea
Peaxi162Scf00088g00076 Petunia axillaris
Peaxi162Scf01694g00020 Petunia axillaris
PGR044G1729 Punica granatum
PGSC0003DMG400007836 Solanum tuberosum
Phvul.003G172000 Phaseolus vulgaris
Phvul.003G172200 Phaseolus vulgaris
Potri.006G257700 Populus trichocarpa
Potri.006G257800 Populus trichocarpa
Potri.018G024000 Populus trichocarpa
Prupe.1G484300 Prunus persica
Prupe.7G252200 Prunus persica
Psat4g034960 Pisum sativum
QL02p021018 Quercus lobata
QL02p090702 Quercus lobata
RcHm_v2.0_Chr2g0087101 Rosa chinensis
RcHm_v2.0_Chr6g0297441 Rosa chinensis
Rhsim03G0252900 Rhododendron simsii
Sabra06G0201600 Salix brachista
Sabra18G0026600 Salix brachista
Sed0001322 Sechium edule
Sed0004036 Sechium edule
Sed0008338 Sechium edule
Sed0008944 Sechium edule
Solyc07g007500.3 Solanum lycopersicum
Solyc12g009860.3 Solanum lycopersicum
Sopen07g003520 Solanum pennellii
Sopen12g004750 Solanum pennellii
TAR383G0642 Trochodendron aralioides
TAR625G0094 Trochodendron aralioides
TAR626G1841 Trochodendron aralioides
TAR673G0004 Trochodendron aralioides
THA.LOC104815296 Tarenaya hassleriana
Thecc.06G032800 Theobroma cacao
Thecc.09G021100 Theobroma cacao
Thecc.09G137200 Theobroma cacao
TPR.G10868 Trifolium pratense
TPR.G7988 Trifolium pratense
TWI34G2014 Tripterygium wilfordii
TWI63G1030 Tripterygium wilfordii
TWI63G1311 Tripterygium wilfordii
unitig_46.g18453 Utricularia gibba
vmacro23527 Vaccinium macrocarpon
VMungo1215G2582 Vigna mungo
VMungo1215G3371 Vigna mungo

User provided reference genes

Program Settings