Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p16060 Brassica napus
A07p07030 Brassica napus
Aa31LG7G15210 Aethionema arabicum
Actinidia02248 Actinidia chinensis
AL4G10420 Arabidopsis lyrata
Aqoxy6G02357 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.63XKYH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B04QBU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JUX7JJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KZ1FWN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PBTS15 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S6V2XE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UB8UIZ Arachis hypogaea
AT2G21280 Arabidopsis thaliana
ATR0149G025 Amborella trichopoda
Atru.chr5.3146 Acer truncatum
AUR62010384 Chenopodium quinoa
AUR62016834 Chenopodium quinoa
AUR62040654 Chenopodium quinoa
BcaB08g34979 Brassica carinata
BcaC02g08802 Brassica carinata
BcaC03g14677 Brassica carinata
BolC2t08257H Brassica oleracea
BolC4t26650H Brassica oleracea
BolC9t55495H Brassica oleracea
BraA07t28491Z Brassica rapa
C02p21170 Brassica napus
C02p21180 Brassica napus
C04p50520 Brassica napus
C09p25880 Brassica napus
CAN.G1635.6 Capsicum annuum
CANSAT11G2690 Cannabis sativa
CARHR112150 Cardamine hirsuta
Carub.0004s0032 Capsella rubella
Ca_20936_v3 Cicer arietinum L.
Cc02_g16880 Coffea canephora
Cc02_g16890 Coffea canephora
CDE02G0092 Ceratophyllum demersum
CDE04G1860 Ceratophyllum demersum
Cfa005114 Carpinus fangiana
Ciclev10028728m.g Citrus clementina
CiPaw.05G073500 Carya illinoinensis
ClCG02G004540 Citrullus lanatus
COL.COLO4_26048 Corchorus olitorius
Cpa.g.sc150.15 Carica papaya
Cre05.g233305 Chlamydomonas reinhardtii
CsaV3_7G000410 Cucumis sativus L.
CSS0010383 Camellia sinensis var. sinensis
CSS0016386 Camellia sinensis var. sinensis
CSS0017259 Camellia sinensis var. sinensis
CSS0033675 Camellia sinensis var. sinensis
DCAR_003686 Daucus carota
Dinv41999 Davidia involucrata
Duzib132G0670 Durio zibethinus
Duzib248G0035 Durio zibethinus
EL10Ac9g21633 Beta vulgaris
Eucgr.G01732 Eucalyptus grandis
FAN15G0109 Fragaria x ananassa
FAN27G3378 Fragaria x ananassa
FvH4_2g10480 Fragaria vesca
Glyma.11G110000 Glycine max
Glyma.12G036900 Glycine max
Gohir.A03G199400 Gossypium hirsutum
Gohir.D02G220700 Gossypium hirsutum
Gorai.005G248600 Gossypium raimondii
GSVIVG01024169001 Vitis vinifera
Haze_02237 Corylus avellana
HPP92_002502 Vanilla planifolia
Hund00177 Selenicereus undatus
Hund00185 Selenicereus undatus
Lalb_Chr03g0025341 Lupinus albus
Lj3g0027328 Lotus japonicus
Lj5C189G13 Lonicera japonica
Lsat_1_v5_gn_8_127980 Lactuca sativa
Manes.04G083100 Manihot esculenta
Mapoly0021s0030 Marchantia polymorpha
MBI05_g17912_MAGBIO Magnolia biondii
MCO05G212 Micromonas commoda
MCO16G248 Micromonas commoda
MD05G1055500 Malus domestica
MD10G1062800 Malus domestica
Medtr4g072040 Medicago truncatula
MELO3C002785.2 Cucumis melo
MELO3C013418.2 Cucumis melo
MELO3C028749.2 Cucumis melo
Migut.N01278 Erythranthe guttata
Nitab4.5_0001154g0060 Nicotiana tabacum
Nitab4.5_0001370g0020 Nicotiana tabacum
Nn4g26316 Nelumbo nucifera
Nn6g32256 Nelumbo nucifera
Nn6g32490 Nelumbo nucifera
Oeu055635.1 Olea europaea
Os02g0834700 Oryza sativa ssp. japonica
Peaxi162Scf00684g00123 Petunia axillaris
PGR042G0282 Punica granatum
PGSC0003DMG402031287 Solanum tuberosum
Phvul.011G038600 Phaseolus vulgaris
Potri.009G124800 Populus trichocarpa
Pp3c7_11090 Physcomitrium patens
Pp3c7_11100 Physcomitrium patens
Pp3s34_200 Physcomitrium patens
PRCOL_00000238 Prasinoderma coloniale
Prupe.8G083600 Prunus persica
Psat7g138880 Pisum sativum
PSO170G3006 Papaver somniferum
PSO210G6769 Papaver somniferum
QL11p046465 Quercus lobata
RcHm_v2.0_Chr6g0267981 Rosa chinensis
Rhsim05G0068100 Rhododendron simsii
Sabra09G0095800 Salix brachista
SalBow3G3875 Salvia bowleyana
Sc18g0005390 Simmondsia chinensis
Sed0012779 Sechium edule
SEGI_01868 Sequoiadendron giganteum
SEGI_33639 Sequoiadendron giganteum
SGA_v2.0_scaffold80G25875 Striga asiatica
SMO146G0042 Selaginella moellendorffii
Solyc09g091970.4 Solanum lycopersicum
Sopen09g034870 Solanum pennellii
Sp4g00470 Schrenkiella parvula
TAR628G0064 Trochodendron aralioides
THA.LOC104804110 Tarenaya hassleriana
Thecc.02G074800 Theobroma cacao
Thhalv10000221m.g Eutrema salsugineum
TPR.G28159 Trifolium pratense
TWI31G1450 Tripterygium wilfordii
unitig_899.g15602 Utricularia gibba
vmacro17420 Vaccinium macrocarpon
VMungo1127G0575 Vigna mungo
Zm00001eb259680 Zea mays

User provided reference genes

Program Settings