Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p06290 Brassica napus
A10p07200 Brassica napus
Aa31LG3G14210 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1650 Anthoceros agrestis
Actinidia30574 Actinidia chinensis
Ah.14g085960 Amaranthus hybridus
AL1G52570 Arabidopsis lyrata
Aqoxy5G02979 Aquilegia oxysepala
Aqoxy5G02980 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.D87PD7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WNQC8Q Arachis hypogaea
AT1G44900 Arabidopsis thaliana
ATR0582G147 Amborella trichopoda
Atru.chr12.1475 Acer truncatum
AUR62034021 Chenopodium quinoa
AUR62042521 Chenopodium quinoa
BcaB04g17580 Brassica carinata
BcaB07g33912 Brassica carinata
BcaC07g37281 Brassica carinata
BcaC08g42885 Brassica carinata
BolC6t35239H Brassica oleracea
BolC8t47556H Brassica oleracea
BraA08t32632Z Brassica rapa
BraSC36t46098Z Brassica rapa
C06p01030 Brassica napus
C08p07110 Brassica napus
CAN.G624.12 Capsicum annuum
CANSAT21G0886 Cannabis sativa
CARHR036120 Cardamine hirsuta
Carub.0001s3540 Capsella rubella
Ca_21434_v3 Cicer arietinum L.
Cc11_g14860 Coffea canephora
CDE05G0767 Ceratophyllum demersum
Cfa009472 Carpinus fangiana
Ciclev10027769m.g Citrus clementina
CiPaw.06G111400 Carya illinoinensis
ClCG10G013030 Citrullus lanatus
COL.COLO4_36324 Corchorus olitorius
Cpa.g.sc1761.2 Carica papaya
Cre07.g338000 Chlamydomonas reinhardtii
CsaV3_3G032880 Cucumis sativus L.
CSS0019126 Camellia sinensis var. sinensis
CSS0044557 Camellia sinensis var. sinensis
DCAR_026439 Daucus carota
Dinv06935 Davidia involucrata
Duzib160G0854 Durio zibethinus
ECA246G5349 Erigeron canadensis
EL10Ac8g19503 Beta vulgaris
Eucgr.B03569 Eucalyptus grandis
FAN12G2733 Fragaria x ananassa
FAN17G1841 Fragaria x ananassa
FvH4_4g22180 Fragaria vesca
FvH4_5g16060 Fragaria vesca
Glyma.07G238400 Glycine max
Glyma.17G035000 Glycine max
Gohir.A03G086700 Gossypium hirsutum
Gohir.A09G002700 Gossypium hirsutum
Gohir.D02G106100 Gossypium hirsutum
Gohir.D09G002500 Gossypium hirsutum
Gorai.005G120400 Gossypium raimondii
Gorai.006G003100 Gossypium raimondii
GSVIVG01001119001 Vitis vinifera
HanXRQChr06g0175361 Helianthus annuus
Haze_12528 Corylus avellana
Haze_26192 Corylus avellana
Hma1.2p1_0738F.1_g210950 Hydrangea macrophylla
Hma1.2p1_0738F.1_g210960 Hydrangea macrophylla
HPP92_023046 Vanilla planifolia
HPP92_023097 Vanilla planifolia
Hund06727 Selenicereus undatus
Lalb_Chr17g0344991 Lupinus albus
Lj3A1078T19 Lonicera japonica
Lj4g0014568 Lotus japonicus
Lsat_1_v5_gn_3_33321 Lactuca sativa
Manes.08G099300 Manihot esculenta
Mapoly0007s0014 Marchantia polymorpha
MBI11_g23193_MAGBIO Magnolia biondii
MCO02G357 Micromonas commoda
MD13G1134100 Malus domestica
MD16G1144700 Malus domestica
Medtr4g122270 Medicago truncatula
MELO3C026749.2 Cucumis melo
Migut.K01134 Erythranthe guttata
MSTRG.8063 Avicennia marina
Nitab4.5_0002113g0010 Nicotiana tabacum
Nitab4.5_0005286g0020 Nicotiana tabacum
Nn4g22072 Nelumbo nucifera
Oeu010265.1 Olea europaea
Os11g0484300 Oryza sativa ssp. japonica
Peaxi162Scf01167g00115 Petunia axillaris
PGR102G2757 Punica granatum
PGSC0003DMG400002190 Solanum tuberosum
Phvul.003G116100 Phaseolus vulgaris
Potri.001G070500 Populus trichocarpa
Pp3c1_34820 Physcomitrium patens
PRCOL_00001965 Prasinoderma coloniale
Prupe.1G211500 Prunus persica
Prupe.8G031700 Prunus persica
Psat0s4013g0080 Pisum sativum
Psat6g019600 Pisum sativum
PSO017G0122 Papaver somniferum
PSO478G1108 Papaver somniferum
QL03p048338 Quercus lobata
RcHm_v2.0_Chr4g0428411 Rosa chinensis
Rhsim13G0167000 Rhododendron simsii
Sabra01G0049500 Salix brachista
SalBow2G1437 Salvia bowleyana
Sc10g0009070 Simmondsia chinensis
Sed0006329 Sechium edule
SGA_v2.0_scaffold258G45751 Striga asiatica
SGA_v2.0_scaffold258G45762 Striga asiatica
SGA_v2.0_scaffold98G29268 Striga asiatica
SGA_v2.0_scaffold98G29270 Striga asiatica
SGA_v2.0_scaffold98G29273 Striga asiatica
SGA_v2.0_scaffold98G29280 Striga asiatica
SHI04104 Sapria himalayana
SMO340G0145 Selaginella moellendorffii
Solyc11g040120.3 Solanum lycopersicum
Sopen11g017320 Solanum pennellii
Sp1g33770 Schrenkiella parvula
TAR629G3206 Trochodendron aralioides
THA.LOC104801409 Tarenaya hassleriana
Thecc.01G239700 Theobroma cacao
Thhalv10011214m.g Eutrema salsugineum
TPR.G25402 Trifolium pratense
TWI18G1079 Tripterygium wilfordii
unitig_26.g10437 Utricularia gibba
vmacro15518 Vaccinium macrocarpon
VMungo1215G2015 Vigna mungo
Zm00001eb169610 Zea mays

User provided reference genes

Program Settings