Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p16470 Brassica napus
Aa31LG9G12730 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4977 Anthoceros agrestis
Actinidia15289 Actinidia chinensis
Ah.07g208480 Amaranthus hybridus
AL8G18540 Arabidopsis lyrata
Aqoxy2G03993 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.527VTZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HC27T5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LS1NQA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UQWD9J Arachis hypogaea
AT5G42660 Arabidopsis thaliana
ATR0733G207 Amborella trichopoda
Atru.chr13.570 Acer truncatum
AUR62033863 Chenopodium quinoa
AUR62040075 Chenopodium quinoa
BcaC01g06051 Brassica carinata
BolC3t14322H Brassica oleracea
BolC9t56805H Brassica oleracea
BraA03t10936Z Brassica rapa
C03p19360 Brassica napus
C09p39260 Brassica napus
CAN.G371.117 Capsicum annuum
CANSAT56G4116 Cannabis sativa
CARHR181570 Cardamine hirsuta
Carub.0008s0636 Capsella rubella
Ca_13326_v3 Cicer arietinum L.
Cc10_g03530 Coffea canephora
CDE01G0176 Ceratophyllum demersum
Cfa004969 Carpinus fangiana
Cfa018454 Carpinus fangiana
Ciclev10003605m.g Citrus clementina
CiPaw.05G060300 Carya illinoinensis
CiPaw.15G071000 Carya illinoinensis
ClCG05G019250 Citrullus lanatus
COL.COLO4_26389 Corchorus olitorius
Cpa.g.sc64.36 Carica papaya
Cpa.g.sc64.37 Carica papaya
CsaV3_3G044830 Cucumis sativus L.
CSS0041102 Camellia sinensis var. sinensis
DCAR_020952 Daucus carota
Dinv36028 Davidia involucrata
Dinv39368 Davidia involucrata
Duzib132G0069 Durio zibethinus
Duzib147G0278 Durio zibethinus
Duzib187G1353 Durio zibethinus
ECA232G3898 Erigeron canadensis
EL10Ac1g01746 Beta vulgaris
Eucgr.F04207 Eucalyptus grandis
FAN01G0570 Fragaria x ananassa
FAN03G3351 Fragaria x ananassa
FAN06G3702 Fragaria x ananassa
FAN10G3758 Fragaria x ananassa
FvH4_7g01740 Fragaria vesca
Glyma.14G078200 Glycine max
Glyma.17G247200 Glycine max
Gohir.A06G012900 Gossypium hirsutum
Gohir.D06G010400 Gossypium hirsutum
Gorai.010G013300 Gossypium raimondii
GSVIVG01009625001 Vitis vinifera
HanXRQChr09g0262371 Helianthus annuus
HanXRQChr09g0268401 Helianthus annuus
HanXRQChr16g0507941 Helianthus annuus
Haze_02428 Corylus avellana
Haze_17612 Corylus avellana
Hma1.2p1_0584F.1_g183470 Hydrangea macrophylla
Hund12053 Selenicereus undatus
Lalb_Chr22g0355361 Lupinus albus
Lj4A47T76 Lonicera japonica
Lj5g0012472 Lotus japonicus
Lsat_1_v5_gn_4_123041 Lactuca sativa
Manes.05G164700 Manihot esculenta
Mapoly0024s0007 Marchantia polymorpha
MBI16_g13161_MAGBIO Magnolia biondii
MD02G1301200 Malus domestica
MD07G1022800 Malus domestica
Medtr1g021670 Medicago truncatula
MELO3C003891.2 Cucumis melo
Migut.N02677 Erythranthe guttata
MSTRG.22285 Avicennia marina
MSTRG.28296 Avicennia marina
MSTRG.9895 Avicennia marina
Nitab4.5_0000110g0060 Nicotiana tabacum
Nitab4.5_0009288g0030 Nicotiana tabacum
Nn1g03995 Nelumbo nucifera
Nn5g29461 Nelumbo nucifera
Oeu004672.1 Olea europaea
Oeu015605.2 Olea europaea
Os01g0749100 Oryza sativa ssp. japonica
Os03g0769050 Oryza sativa ssp. japonica
Peaxi162Scf00280g00811 Petunia axillaris
Peaxi162Scf01064g00263 Petunia axillaris
PGR083G1137 Punica granatum
PGSC0003DMG400016885 Solanum tuberosum
Phvul.001G017600 Phaseolus vulgaris
Potri.002G149900 Populus trichocarpa
Pp3c14_23720 Physcomitrium patens
Prupe.2G023300 Prunus persica
Psat6g010720 Pisum sativum
PSO541G2319 Papaver somniferum
PSO675G5635 Papaver somniferum
QL02p007186 Quercus lobata
RcHm_v2.0_Chr1g0318301 Rosa chinensis
RcHm_v2.0_Chr4g0418501 Rosa chinensis
Sabra02G0118600 Salix brachista
SalBow8G5466 Salvia bowleyana
Sc02g0006640 Simmondsia chinensis
Sed0006245 Sechium edule
Sed0012944 Sechium edule
SEGI_01316 Sequoiadendron giganteum
SEGI_20351 Sequoiadendron giganteum
SGA_v2.0_scaffold14G07051 Striga asiatica
SHI18077 Sapria himalayana
SMO351G0006 Selaginella moellendorffii
Solyc04g079770.3 Solanum lycopersicum
Sopen04g033350 Solanum pennellii
Sp6g13080 Schrenkiella parvula
TAR376G0340 Trochodendron aralioides
TAR381G1236 Trochodendron aralioides
THA.LOC104803394 Tarenaya hassleriana
Thecc.08G020400 Theobroma cacao
Thhalv10013482m.g Eutrema salsugineum
TPR.G15769 Trifolium pratense
TWI12G0811 Tripterygium wilfordii
TWI36G1262 Tripterygium wilfordii
unitig_578.g16718 Utricularia gibba
vmacro21599 Vaccinium macrocarpon
VMungo0647G0317 Vigna mungo
Zm00001eb153240 Zea mays
Zm00001eb213920 Zea mays

User provided reference genes

Program Settings