Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p30800 Brassica napus
Aa31LG9G5870 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2081 Anthoceros agrestis
Actinidia02205 Actinidia chinensis
Actinidia03414 Actinidia chinensis
Actinidia25920 Actinidia chinensis
Ah.07g199910 Amaranthus hybridus
AL8G11000 Arabidopsis lyrata
AL8G11110 Arabidopsis lyrata
Aqoxy3G02600 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GKQN4T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NKK7HF Arachis hypogaea
AT5G47090 Arabidopsis thaliana
ATR0665G401 Amborella trichopoda
Atru.chr9.1156 Acer truncatum
AUR62007192 Chenopodium quinoa
AUR62018811 Chenopodium quinoa
BcaC03g15262 Brassica carinata
BcaC03g16934 Brassica carinata
BcaC07g39778 Brassica carinata
BolC2t08897H Brassica oleracea
BolC2t10867H Brassica oleracea
BolC8t50609H Brassica oleracea
BraA02t08094Z Brassica rapa
C02p28550 Brassica napus
C02p48360 Brassica napus
C08p30000 Brassica napus
CAN.G422.12 Capsicum annuum
CANSAT21G0053 Cannabis sativa
CANSAT21G0160 Cannabis sativa
CANSAT21G1035 Cannabis sativa
CARHR174300 Cardamine hirsuta
CARHR174410 Cardamine hirsuta
Carub.0008s0066 Capsella rubella
Carub.0008s0069 Capsella rubella
Ca_22022_v3 Cicer arietinum L.
CBR_g49667 Chara braunii
Cc08_g11160 Coffea canephora
CDE02G1890 Ceratophyllum demersum
CDE11G0859 Ceratophyllum demersum
Cfa012348 Carpinus fangiana
Ciclev10021261m.g Citrus clementina
CiPaw.11G084400 Carya illinoinensis
ClCG10G002100 Citrullus lanatus
COL.COLO4_06694 Corchorus olitorius
Cpa.g.sc98.70 Carica papaya
Cre03.g170100 Chlamydomonas reinhardtii
CsaV3_3G002190 Cucumis sativus L.
CSS0016826 Camellia sinensis var. sinensis
CSS0027189 Camellia sinensis var. sinensis
DCAR_004514 Daucus carota
Dinv25153 Davidia involucrata
Dinv28889 Davidia involucrata
Duzib205G0801 Durio zibethinus
EL10Ac5g12236 Beta vulgaris
Eucgr.E00334 Eucalyptus grandis
FAN04G1103 Fragaria x ananassa
FAN08G0488 Fragaria x ananassa
FAN13G0941 Fragaria x ananassa
FAN18G2558 Fragaria x ananassa
FvH4_5g20690 Fragaria vesca
Glyma.05G067000 Glycine max
Gohir.A08G162200 Gossypium hirsutum
Gohir.D08G182200 Gossypium hirsutum
Gorai.004G191100 Gossypium raimondii
GSVIVG01013285001 Vitis vinifera
HanXRQChr03g0089621 Helianthus annuus
Haze_08348 Corylus avellana
Hma1.2p1_1672F.1_g296810 Hydrangea macrophylla
HPP92_014398 Vanilla planifolia
Hund11307 Selenicereus undatus
Lalb_Chr16g0386381 Lupinus albus
Lj4g0004061 Lotus japonicus
Lj8A280T20 Lonicera japonica
Lj8A284T12 Lonicera japonica
Lj8A284T15 Lonicera japonica
Lj8A286T53 Lonicera japonica
Lj8C280G0 Lonicera japonica
Lj8C284T4 Lonicera japonica
Lsat_1_v5_gn_6_94780 Lactuca sativa
Manes.17G024600 Manihot esculenta
MBI04_g46823_MAGBIO Magnolia biondii
MCO11G792 Micromonas commoda
MD04G1054200 Malus domestica
Medtr4g099190 Medicago truncatula
MELO3C013891.2 Cucumis melo
Migut.E01036 Erythranthe guttata
Migut.E01310 Erythranthe guttata
MSTRG.13771 Avicennia marina
Nitab4.5_0000506g0180 Nicotiana tabacum
Nitab4.5_0013289g0030 Nicotiana tabacum
Oeu054287.1 Olea europaea
Os06g0139700 Oryza sativa ssp. japonica
Peaxi162Scf00190g00616 Petunia axillaris
PGR042G3635 Punica granatum
PGSC0003DMG400026583 Solanum tuberosum
Phvul.003G226000 Phaseolus vulgaris
Potri.001G149800 Populus trichocarpa
Pp3c16_2730 Physcomitrium patens
Prupe.5G053300 Prunus persica
Psat4g074520 Pisum sativum
PSO063G5173 Papaver somniferum
QL12p008443 Quercus lobata
RcHm_v2.0_Chr4g0446321 Rosa chinensis
RcHm_v2.0_Chr6g0308841 Rosa chinensis
RcHm_v2.0_Chr6g0308851 Rosa chinensis
RcHm_v2.0_Chr7g0206421 Rosa chinensis
Rhsim04G0176100 Rhododendron simsii
Rhsim04G0176300 Rhododendron simsii
Sabra01G0119800 Salix brachista
Sc22g0001160 Simmondsia chinensis
Sed0003222 Sechium edule
SEGI_16450 Sequoiadendron giganteum
SGA_v2.0_scaffold20G09256 Striga asiatica
SHI06573 Sapria himalayana
SHI06574 Sapria himalayana
SHI07660 Sapria himalayana
SMO171G0121 Selaginella moellendorffii
Solyc06g060990.4 Solanum lycopersicum
Sopen06g021130 Solanum pennellii
Sp2g11900 Schrenkiella parvula
TAR375G0262 Trochodendron aralioides
Thecc.03G237900 Theobroma cacao
Thhalv10000969m.g Eutrema salsugineum
TPR.G25737 Trifolium pratense
TWI60G1123 Tripterygium wilfordii
unitig_699.g19773 Utricularia gibba
vmacro00388 Vaccinium macrocarpon
VMungo0251G0880 Vigna mungo
Zm00001eb377550 Zea mays

User provided reference genes

Program Settings