Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p02680 Brassica napus
A03p06720 Brassica napus
A10p23960 Brassica napus
Aa31LG11G14750 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3157 Anthoceros agrestis
Actinidia35746 Actinidia chinensis
AL6G25480 Arabidopsis lyrata
Aqoxy3G02941 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2H702Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2LS7ZQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.48HX9C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DMWP0X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GQ5XJ3 Arachis hypogaea
AT5G14710 Arabidopsis thaliana
ATR0730G058 Amborella trichopoda
ATR1096G027 Amborella trichopoda
Atru.chr6.2220 Acer truncatum
AUR62030334 Chenopodium quinoa
AUR62031990 Chenopodium quinoa
BcaB01g05101 Brassica carinata
BcaC03g13452 Brassica carinata
BcaC04g19017 Brassica carinata
BcaNung03101 Brassica carinata
BolC2t06657H Brassica oleracea
BolC3t13274H Brassica oleracea
BolC9t59081H Brassica oleracea
BraA02t05237Z Brassica rapa
BraA03t10005Z Brassica rapa
BraA10t44460Z Brassica rapa
C02p07250 Brassica napus
C03p07740 Brassica napus
C09p62430 Brassica napus
CAN.G206.22 Capsicum annuum
CANSAT64G0964 Cannabis sativa
CARHR198600 Cardamine hirsuta
Carub.0006s1288 Capsella rubella
Ca_03224_v3 Cicer arietinum L.
Ca_16579_v3 Cicer arietinum L.
CBR_g5628 Chara braunii
Cc07_g02120 Coffea canephora
CDE08G0643 Ceratophyllum demersum
Cfa007418 Carpinus fangiana
Ciclev10017692m.g Citrus clementina
CiPaw.03G039200 Carya illinoinensis
ClCG00G003490 Citrullus lanatus
ClCG09G019010 Citrullus lanatus
COL.COLO4_28991 Corchorus olitorius
Cpa.g.c30698.2 Carica papaya
Cre13.g571000 Chlamydomonas reinhardtii
CsaV3_5G027340 Cucumis sativus L.
CSS0000489 Camellia sinensis var. sinensis
CSS0035017 Camellia sinensis var. sinensis
DCAR_011237 Daucus carota
Dinv33481 Davidia involucrata
Dinv35076 Davidia involucrata
Duzib264G1216 Durio zibethinus
ECA238G3069 Erigeron canadensis
EL10Ac3g07214 Beta vulgaris
Eucgr.I01785 Eucalyptus grandis
FAN02G2714 Fragaria x ananassa
FAN05G5625 Fragaria x ananassa
FAN09G3162 Fragaria x ananassa
FAN14G2625 Fragaria x ananassa
FvH4_6g50830 Fragaria vesca
Glyma.04G247000 Glycine max
Glyma.06G115700 Glycine max
Gohir.A07G221200 Gossypium hirsutum
Gohir.D07G227900 Gossypium hirsutum
Gorai.001G262800 Gossypium raimondii
GSVIVG01032459001 Vitis vinifera
HanXRQChr07g0198791 Helianthus annuus
HanXRQChr14g0450361 Helianthus annuus
Haze_14684 Corylus avellana
Hma1.2p1_0056F.1_g031653 Hydrangea macrophylla
Hma1.2p1_0846F.1_g227700 Hydrangea macrophylla
Hma1.2p1_1415F.1_g281960 Hydrangea macrophylla
HPP92_022049 Vanilla planifolia
Hund02345 Selenicereus undatus
Lalb_Chr10g0093921 Lupinus albus
Lj1g0023236 Lotus japonicus
Lsat_1_v5_gn_2_91880 Lactuca sativa
Manes.17G116000 Manihot esculenta
Mapoly0005s0179 Marchantia polymorpha
MBI19_g07248_MAGBIO Magnolia biondii
MBI19_g17406_MAGBIO Magnolia biondii
MCO07G269 Micromonas commoda
MD17G1033600 Malus domestica
Medtr3g088470 Medicago truncatula
MELO3C005689.2 Cucumis melo
MELO3C033557.2 Cucumis melo
Migut.H00108 Erythranthe guttata
MSTRG.3166 Avicennia marina
Nitab4.5_0006281g0070 Nicotiana tabacum
Nitab4.5_0007141g0020 Nicotiana tabacum
Nn3g16859 Nelumbo nucifera
Oeu004718.1 Olea europaea
Os01g0339600 Oryza sativa ssp. japonica
Os10g0395500 Oryza sativa ssp. japonica
Peaxi162Scf00129g01228 Petunia axillaris
PGR142G2538 Punica granatum
PGSC0003DMG400000490 Solanum tuberosum
Phvul.009G127800 Phaseolus vulgaris
Potri.001G349500 Populus trichocarpa
Pp3c26_1260 Physcomitrium patens
Prupe.3G286100 Prunus persica
PSO210G7688 Papaver somniferum
PSO566G0352 Papaver somniferum
PSO782G1469 Papaver somniferum
QL02p076043 Quercus lobata
QL02p076078 Quercus lobata
RcHm_v2.0_Chr2g0172221 Rosa chinensis
Rhsim08G0053800 Rhododendron simsii
Sabra16G0228900 Salix brachista
Sc03g0007970 Simmondsia chinensis
Sed0018290 Sechium edule
SEGI_25092 Sequoiadendron giganteum
SGA_v2.0_scaffold2848G54225 Striga asiatica
SHI16396 Sapria himalayana
SMO367G0706 Selaginella moellendorffii
Solyc02g086780.4 Solanum lycopersicum
Sopen02g031550 Solanum pennellii
Sp6g29330 Schrenkiella parvula
TAR371G1194 Trochodendron aralioides
THA.LOC104821076 Tarenaya hassleriana
Thecc.04G011100 Theobroma cacao
Thhalv10015025m.g Eutrema salsugineum
TPR.G13476 Trifolium pratense
TWI12G0619 Tripterygium wilfordii
unitig_746.g26552 Utricularia gibba
Zm00001eb048120 Zea mays

User provided reference genes

Program Settings