Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p57670 Brassica napus
Aa31LG7G2230 Aethionema arabicum
Aa31sc193G20 Aethionema arabicum
Aa31sc193G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3527 Anthoceros agrestis
Actinidia20956 Actinidia chinensis
Ah.14g084080 Amaranthus hybridus
Ah.14g084100 Amaranthus hybridus
AL1G31260 Arabidopsis lyrata
AL1G53920 Arabidopsis lyrata
AL3G40460 Arabidopsis lyrata
AL6G37990 Arabidopsis lyrata
AL7G24580 Arabidopsis lyrata
AL7G30680 Arabidopsis lyrata
Aqoxy7G03235 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.00M671 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0JVE27 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.65BVJ7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GE8FUD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IUS3AS Arachis hypogaea
AT4G28030 Arabidopsis thaliana
ATR0580G232 Amborella trichopoda
Atru.chr7.506 Acer truncatum
AUR62028411 Chenopodium quinoa
AUR62039751 Chenopodium quinoa
BcaC06g32650 Brassica carinata
BcaC09g50518 Brassica carinata
BcaC09g50520 Brassica carinata
BolC1t02395H Brassica oleracea
BolC2t09466H Brassica oleracea
BraA03t14833Z Brassica rapa
C01p24460 Brassica napus
C02p34360 Brassica napus
C07p55880 Brassica napus
CAN.G1870.3 Capsicum annuum
CANSAT11G0464 Cannabis sativa
CARHR235730 Cardamine hirsuta
Carub.0007s1276 Capsella rubella
Ca_21184_v3 Cicer arietinum L.
Cc00_g30300 Coffea canephora
Cc06_g14000 Coffea canephora
CDE02G3066 Ceratophyllum demersum
Cfa013546 Carpinus fangiana
Ciclev10010607m.g Citrus clementina
CiPaw.07G186800 Carya illinoinensis
ClCG02G004040 Citrullus lanatus
COL.COLO4_27474 Corchorus olitorius
Cpa.g.sc75.16 Carica papaya
Cre02.g084550 Chlamydomonas reinhardtii
CsaV3_7G001070 Cucumis sativus L.
CSS0014936 Camellia sinensis var. sinensis
DCAR_014719 Daucus carota
Dinv41304 Davidia involucrata
Duzib187G0641 Durio zibethinus
ECA236G1842 Erigeron canadensis
EL10Ac8g18867 Beta vulgaris
Eucgr.C01245 Eucalyptus grandis
FAN05G3225 Fragaria x ananassa
FAN05G4341 Fragaria x ananassa
FAN07G2740 Fragaria x ananassa
FAN12G3847 Fragaria x ananassa
FAN17G0482 Fragaria x ananassa
FvH4_4g23510 Fragaria vesca
Glyma.13G091800 Glycine max
Glyma.17G068500 Glycine max
Gohir.A08G096462 Gossypium hirsutum
Gohir.D08G097100 Gossypium hirsutum
Gorai.004G103800 Gossypium raimondii
GSVIVG01023749001 Vitis vinifera
HanXRQChr10g0284091 Helianthus annuus
Haze_22164 Corylus avellana
Haze_22166 Corylus avellana
Hma1.2p1_1531F.1_g289230 Hydrangea macrophylla
HPP92_025686 Vanilla planifolia
Hund08988 Selenicereus undatus
Hund26406 Selenicereus undatus
Lalb_Chr13g0300531 Lupinus albus
Lj4g0011389 Lotus japonicus
Lj9A728T23 Lonicera japonica
Lsat_1_v5_gn_8_64360 Lactuca sativa
Manes.06G030000 Manihot esculenta
Mapoly0019s0038 Marchantia polymorpha
MBI14_g08080_MAGBIO Magnolia biondii
MCO03G095 Micromonas commoda
MD16G1262600 Malus domestica
Medtr4g129490 Medicago truncatula
MELO3C013348.2 Cucumis melo
Migut.J01418 Erythranthe guttata
MSTRG.19675 Avicennia marina
Nitab4.5_0005551g0010 Nicotiana tabacum
Nitab4.5_0005985g0010 Nicotiana tabacum
Nn4g23704 Nelumbo nucifera
Oeu058827.1 Olea europaea
Os08g0260000 Oryza sativa ssp. japonica
Peaxi162Scf00525g00817 Petunia axillaris
PGR142G3644 Punica granatum
PGSC0003DMG402011224 Solanum tuberosum
Phvul.003G151100 Phaseolus vulgaris
Potri.006G176500 Populus trichocarpa
Pp3c11_5280 Physcomitrium patens
Pp3c1_4600 Physcomitrium patens
PRCOL_00005269 Prasinoderma coloniale
Prupe.1G097300 Prunus persica
Psat4g010480 Pisum sativum
Psat4g048000 Pisum sativum
Psat4g048120 Pisum sativum
PSO063G5638 Papaver somniferum
PSO782G5004 Papaver somniferum
QL02p095666 Quercus lobata
RcHm_v2.0_Chr4g0404931 Rosa chinensis
Rhsim01G0012100 Rhododendron simsii
Sabra06G0134700 Salix brachista
SalBow6G0174 Salvia bowleyana
Sc08g0005630 Simmondsia chinensis
Sed0012123 Sechium edule
SEGI_16930 Sequoiadendron giganteum
SGA_v2.0_scaffold66G22515 Striga asiatica
Solyc07g006340.3 Solanum lycopersicum
Sopen07g002430 Solanum pennellii
Sp7g25980 Schrenkiella parvula
TAR383G0601 Trochodendron aralioides
THA.LOC104811821 Tarenaya hassleriana
Thecc.09G161700 Theobroma cacao
Thhalv10025984m.g Eutrema salsugineum
TPR.G5298 Trifolium pratense
TWI63G0727 Tripterygium wilfordii
unitig_0.g187 Utricularia gibba
vmacro13073 Vaccinium macrocarpon
VMungo1215G3105 Vigna mungo
Zm00001eb412590 Zea mays

User provided reference genes

Program Settings