Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p26080 Brassica napus
Aa31LG1G29180 Aethionema arabicum
Actinidia21062 Actinidia chinensis
Actinidia24843 Actinidia chinensis
Ah.15g093860 Amaranthus hybridus
AL4G47410 Arabidopsis lyrata
Aqoxy5G00699 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5I5ID6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.66ANXA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.INQ3MB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L0WASJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XK0FMC Arachis hypogaea
AT2G47830 Arabidopsis thaliana
ATR0706G146 Amborella trichopoda
Atru.chr5.1230 Acer truncatum
Atru.chr5.1231 Acer truncatum
AUR62033190 Chenopodium quinoa
AUR62033191 Chenopodium quinoa
AUR62043263 Chenopodium quinoa
BcaB01g03155 Brassica carinata
BcaC01g05016 Brassica carinata
BolC3t15458H Brassica oleracea
BraA03t11823Z Brassica rapa
C03p31100 Brassica napus
CAN.G1349.13 Capsicum annuum
CAN.G1562.6 Capsicum annuum
CANSAT25G3369 Cannabis sativa
CARHR055860 Cardamine hirsuta
CARHR143220 Cardamine hirsuta
CARHR220570 Cardamine hirsuta
Carub.0004s3055 Capsella rubella
Ca_10357_v3 Cicer arietinum L.
Cc01_g20520 Coffea canephora
CDE02G2579 Ceratophyllum demersum
Cfa003705 Carpinus fangiana
Cfa005987 Carpinus fangiana
Cfa024758 Carpinus fangiana
Ciclev10006598m.g Citrus clementina
Ciclev10019856m.g Citrus clementina
CiPaw.07G103700 Carya illinoinensis
ClCG09G006190 Citrullus lanatus
Cpa.g.sc9.190 Carica papaya
CsaV3_7G028940 Cucumis sativus L.
CSS0004593 Camellia sinensis var. sinensis
CSS0018114 Camellia sinensis var. sinensis
DCAR_012404 Daucus carota
DCAR_017872 Daucus carota
Dinv19731 Davidia involucrata
Duzib133G0811 Durio zibethinus
Duzib133G1109 Durio zibethinus
Duzib133G1128 Durio zibethinus
ECA248G3501 Erigeron canadensis
EL10Ac7g17491 Beta vulgaris
Eucgr.K03452 Eucalyptus grandis
FAN10G2908 Fragaria x ananassa
FAN15G3695 Fragaria x ananassa
FAN19G1365 Fragaria x ananassa
FAN20G2691 Fragaria x ananassa
FAN21G1188 Fragaria x ananassa
FAN24G0883 Fragaria x ananassa
FvH4_c6g00080 Fragaria vesca
FvH4_c6g00110 Fragaria vesca
Glyma.02G153800 Glycine max
Glyma.10G020300 Glycine max
Gohir.A08G074500 Gossypium hirsutum
Gohir.D08G083800 Gossypium hirsutum
Gorai.004G088200 Gossypium raimondii
GSVIVG01010968001 Vitis vinifera
HanXRQChr01g0001661 Helianthus annuus
Hma1.2p1_0399F.1_g143930 Hydrangea macrophylla
HPP92_011840 Vanilla planifolia
Hund05401 Selenicereus undatus
Lalb_Chr06g0163361 Lupinus albus
Lj2C1189T5 Lonicera japonica
Lj5g0023248 Lotus japonicus
Lsat_1_v5_gn_0_19060 Lactuca sativa
Lsat_1_v5_gn_5_189341 Lactuca sativa
Manes.05G065800 Manihot esculenta
Mapoly0007s0103 Marchantia polymorpha
MCO08G095 Micromonas commoda
MD03G1284200 Malus domestica
Medtr1g088870 Medicago truncatula
MELO3C016044.2 Cucumis melo
Migut.D00184 Erythranthe guttata
Nitab4.5_0001447g0040 Nicotiana tabacum
Nitab4.5_0005578g0030 Nicotiana tabacum
Nitab4.5_0011064g0040 Nicotiana tabacum
Nn5g30061 Nelumbo nucifera
Oeu011429.1 Olea europaea
Oeu046707.1 Olea europaea
Os03g0346800 Oryza sativa ssp. japonica
Peaxi162Scf00067g01814 Petunia axillaris
Peaxi162Scf00067g01819 Petunia axillaris
PGR044G2614 Punica granatum
PGSC0003DMG402011364 Solanum tuberosum
Phvul.007G165166 Phaseolus vulgaris
Potri.002G209023 Populus trichocarpa
Pp3c10_1060 Physcomitrium patens
Pp3c14_1830 Physcomitrium patens
PRCOL_00000973 Prasinoderma coloniale
Prupe.8G255700 Prunus persica
Psat6g167000 Pisum sativum
PSO832G0331 Papaver somniferum
QL12p030562 Quercus lobata
RcHm_v2.0_Chr6g0293181 Rosa chinensis
Rhsim01G0282400 Rhododendron simsii
SalBow3G3633 Salvia bowleyana
Sc05g0004310 Simmondsia chinensis
Sed0015917 Sechium edule
Sed0025005 Sechium edule
SEGI_02714 Sequoiadendron giganteum
SEGI_27258 Sequoiadendron giganteum
SEGI_29117 Sequoiadendron giganteum
SEGI_34041 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00388 Striga asiatica
SMO145G0291 Selaginella moellendorffii
Solyc09g074740.2 Solanum lycopersicum
Solyc09g074750.3 Solanum lycopersicum
Sopen09g029580 Solanum pennellii
Sopen09g029600 Solanum pennellii
Sp4g29760 Schrenkiella parvula
TAR365G0282 Trochodendron aralioides
THA.LOC104817512 Tarenaya hassleriana
Thecc.01G294000 Theobroma cacao
Thhalv10001431m.g Eutrema salsugineum
TPR.G33972 Trifolium pratense
TWI14G0999 Tripterygium wilfordii
vmacro14988 Vaccinium macrocarpon
VMungo0720G1827 Vigna mungo
Zm00001eb016640 Zea mays

User provided reference genes

Program Settings