Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p34500 Brassica napus
Aa31LG8G2120 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1801 Anthoceros agrestis
Actinidia12577 Actinidia chinensis
Ah.04g164270 Amaranthus hybridus
AL3G27230 Arabidopsis lyrata
Aqoxy4G00321 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6IHZ0U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.STN4DM Arachis hypogaea
AT3G14910 Arabidopsis thaliana
ATR0602G196 Amborella trichopoda
Atru.chr2.2147 Acer truncatum
AUR62019575 Chenopodium quinoa
AUR62042779 Chenopodium quinoa
BcaB06g25332 Brassica carinata
BolC5t33913H Brassica oleracea
BraA05t22270Z Brassica rapa
C05p52240 Brassica napus
CAN.G375.14 Capsicum annuum
CAN.G713.20 Capsicum annuum
CANSAT35G0289 Cannabis sativa
CARHR089850 Cardamine hirsuta
Carub.0003s1457 Capsella rubella
Ca_12194_v3 Cicer arietinum L.
Cc05_g11090 Coffea canephora
CDE04G1093 Ceratophyllum demersum
Cfa019567 Carpinus fangiana
Ciclev10021305m.g Citrus clementina
CiPaw.11G160400 Carya illinoinensis
ClCG11G017460 Citrullus lanatus
COL.COLO4_17547 Corchorus olitorius
Cpa.g.sc77.7 Carica papaya
Cre12.g546450 Chlamydomonas reinhardtii
CsaV3_4G033110 Cucumis sativus L.
CSS0014195 Camellia sinensis var. sinensis
CSS0021542 Camellia sinensis var. sinensis
CSS0043856 Camellia sinensis var. sinensis
DCAR_013156 Daucus carota
Dinv18364 Davidia involucrata
Duzib187G1570 Durio zibethinus
ECA240G1747 Erigeron canadensis
EL10Ac4g08344 Beta vulgaris
Eucgr.K01884 Eucalyptus grandis
FAN11G0057 Fragaria x ananassa
FAN16G1727 Fragaria x ananassa
FAN21G3716 Fragaria x ananassa
FAN25G1161 Fragaria x ananassa
FvH4_3g18310 Fragaria vesca
Glyma.06G228900 Glycine max
Glyma.12G157600 Glycine max
Gohir.A01G054400 Gossypium hirsutum
Gohir.D01G042724 Gossypium hirsutum
Gorai.002G054700 Gossypium raimondii
GSVIVG01014199001 Vitis vinifera
HanXRQChr15g0476211 Helianthus annuus
Haze_09324 Corylus avellana
HPP92_023429 Vanilla planifolia
Hund02252 Selenicereus undatus
Hund02254 Selenicereus undatus
Lalb_Chr01g0006831 Lupinus albus
Lalb_Chr03g0031171 Lupinus albus
Lj1A829G32 Lonicera japonica
Lj3g0001987 Lotus japonicus
Lsat_1_v5_gn_9_99900 Lactuca sativa
Lsat_1_v5_gn_9_99920 Lactuca sativa
Manes.03G101200 Manihot esculenta
Mapoly0061s0004 Marchantia polymorpha
MBI07_g09566_MAGBIO Magnolia biondii
MD03G1243500 Malus domestica
MD11G1263600 Malus domestica
MD11G1263700 Malus domestica
Medtr8g464030 Medicago truncatula
MELO3C025639.2 Cucumis melo
Migut.H01998 Erythranthe guttata
MSTRG.14233 Avicennia marina
Nitab4.5_0003565g0040 Nicotiana tabacum
Nitab4.5_0006953g0050 Nicotiana tabacum
Nn1g04439 Nelumbo nucifera
Nn1g09174 Nelumbo nucifera
Oeu025333.1 Olea europaea
Os05g0581100 Oryza sativa ssp. japonica
Os09g0315800 Oryza sativa ssp. japonica
Peaxi162Scf00111g01475 Petunia axillaris
PGR031G2045 Punica granatum
PGSC0003DMG400007071 Solanum tuberosum
PGSC0003DMG400011947 Solanum tuberosum
Phvul.011G162200 Phaseolus vulgaris
Potri.001G390700 Populus trichocarpa
Pp3c4_25540 Physcomitrium patens
Prupe.4G164800 Prunus persica
Psat0s1037g0040 Pisum sativum
Psat3g077000 Pisum sativum
Psat4g090840 Pisum sativum
PSO478G1672 Papaver somniferum
PSO782G3001 Papaver somniferum
QL08p026242 Quercus lobata
RcHm_v2.0_Chr5g0030941 Rosa chinensis
Rhsim06G0207800 Rhododendron simsii
SalBow7G4178 Salvia bowleyana
SalBow7G4376 Salvia bowleyana
Sc16g0007570 Simmondsia chinensis
Sc16g0007580 Simmondsia chinensis
Sed0007644 Sechium edule
SEGI_16322 Sequoiadendron giganteum
SGA_v2.0_scaffold130G34293 Striga asiatica
SHI27609 Sapria himalayana
SMO367G0522 Selaginella moellendorffii
Solyc07g062450.3 Solanum lycopersicum
Sopen07g030690 Solanum pennellii
Sp3g13120 Schrenkiella parvula
TAR627G0847 Trochodendron aralioides
THA.LOC104822564 Tarenaya hassleriana
Thecc.07G113800 Theobroma cacao
Thecc.07G114000 Theobroma cacao
Thecc.07G114100 Theobroma cacao
Thecc.07G114700 Theobroma cacao
Thecc.07G114900 Theobroma cacao
Thecc.07G115200 Theobroma cacao
Thecc.07G115900 Theobroma cacao
Thhalv10020708m.g Eutrema salsugineum
TPR.G16488 Trifolium pratense
TWI39G0589 Tripterygium wilfordii
unitig_52.g17395 Utricularia gibba
vmacro11937 Vaccinium macrocarpon
vmacro11938 Vaccinium macrocarpon
vmacro11939 Vaccinium macrocarpon
vmacro23384 Vaccinium macrocarpon
vmacro23465 Vaccinium macrocarpon
VMungo1127G0879 Vigna mungo
Zm00001eb309730 Zea mays

User provided reference genes

Program Settings