Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p51040 Brassica napus
Aa31sc61G130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.810 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.813 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.271 Anthoceros agrestis
Actinidia00678 Actinidia chinensis
Actinidia11263 Actinidia chinensis
Ah.01g024650 Amaranthus hybridus
AL3G44200 Arabidopsis lyrata
Aqoxy7G02250 Aquilegia oxysepala
Aqoxy7G02252 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5LV02X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AY4NJ9 Arachis hypogaea
AT2G07680 Arabidopsis thaliana
ATR0739G176 Amborella trichopoda
Atru.chr10.2415_Atru.chr10.2416 Acer truncatum
AUR62027001 Chenopodium quinoa
AUR62030841 Chenopodium quinoa
BolC7t45452H Brassica oleracea
BraA03t14190Z Brassica rapa
C07p49470 Brassica napus
CAN.G407.7 Capsicum annuum
CAN.G407.8 Capsicum annuum
CANSAT56G2614 Cannabis sativa
CARHR104090 Cardamine hirsuta
CARHR104110 Cardamine hirsuta
Carub.0013s0013 Capsella rubella
Ca_01014_v3 Cicer arietinum L.
CBR_g25873 Chara braunii
Cc04_g05140 Coffea canephora
CDE02G0759 Ceratophyllum demersum
CDE02G3275 Ceratophyllum demersum
CDE02G4359 Ceratophyllum demersum
Cfa001878 Carpinus fangiana
Ciclev10024806m.g Citrus clementina
CiPaw.01G254800 Carya illinoinensis
ClCG10G012900 Citrullus lanatus
COL.COLO4_26706 Corchorus olitorius
Cpa.g.c32507.2 Carica papaya
Cpa.g.sc10.70 Carica papaya
Cpa.g.sc10.72 Carica papaya
Cre14.g618600 Chlamydomonas reinhardtii
Cre17.g734612 Chlamydomonas reinhardtii
CsaV3_3G032770 Cucumis sativus L.
CSS0012465 Camellia sinensis var. sinensis
CSS0023899 Camellia sinensis var. sinensis
CSS0044500 Camellia sinensis var. sinensis
CSS0047540 Camellia sinensis var. sinensis
DCAR_003926 Daucus carota
DCAR_003927 Daucus carota
Dinv21413 Davidia involucrata
Duzib235G1084 Durio zibethinus
ECA247G2933 Erigeron canadensis
ECA247G3469 Erigeron canadensis
EL10Ac9g22203 Beta vulgaris
Eucgr.F03961 Eucalyptus grandis
FAN02G4473 Fragaria x ananassa
FAN05G1320 Fragaria x ananassa
FAN14G1613 Fragaria x ananassa
FvH4_6g28590 Fragaria vesca
Glyma.13G370300 Glycine max
Gohir.A05G119000 Gossypium hirsutum
Gohir.D05G119900 Gossypium hirsutum
Gohir.D05G120000 Gossypium hirsutum
Gorai.009G123500 Gossypium raimondii
GSVIVG01015960001 Vitis vinifera
GSVIVG01015962001 Vitis vinifera
HanXRQChr04g0099601 Helianthus annuus
Haze_16670 Corylus avellana
HPP92_015868 Vanilla planifolia
Lalb_Chr22g0349431 Lupinus albus
Lj3g0008200 Lotus japonicus
Lj9C493G4 Lonicera japonica
Lsat_1_v5_gn_1_31080 Lactuca sativa
Manes.11G066800 Manihot esculenta
Mapoly0011s0164 Marchantia polymorpha
Mapoly0171s0004 Marchantia polymorpha
MBI15_g18249_MAGBIO Magnolia biondii
MBI15_g37161_MAGBIO Magnolia biondii
MD09G1225000 Malus domestica
Medtr2g105190 Medicago truncatula
MELO3C026737.2 Cucumis melo
Migut.I00691 Erythranthe guttata
MSTRG.11184 Avicennia marina
Nitab4.5_0002700g0190 Nicotiana tabacum
Nitab4.5_0010868g0020 Nicotiana tabacum
Nitab4.5_0022438g0010 Nicotiana tabacum
Nn8g39905 Nelumbo nucifera
Nn8g39906 Nelumbo nucifera
Nn8g39907 Nelumbo nucifera
Oeu009803.1 Olea europaea
Oeu009804.1 Olea europaea
Os06g0184700 Oryza sativa ssp. japonica
Os06g0184766 Oryza sativa ssp. japonica
Peaxi162Scf00553g00540 Petunia axillaris
PGR102G2529 Punica granatum
PGSC0003DMG400014149 Solanum tuberosum
Phvul.005G175600 Phaseolus vulgaris
Potri.003G182601 Populus trichocarpa
Pp3c16_8800 Physcomitrium patens
Pp3c22_9930 Physcomitrium patens
Prupe.3G098500 Prunus persica
Psat5g098320 Pisum sativum
PSO384G0944 Papaver somniferum
QL05p035924 Quercus lobata
QL05p035943 Quercus lobata
QL05p035964 Quercus lobata
RcHm_v2.0_Chr2g0132931 Rosa chinensis
Rhsim08G0205400 Rhododendron simsii
Sabra03G0133400 Salix brachista
SalBow7G3127 Salvia bowleyana
Sc12g0008290 Simmondsia chinensis
Sed0004285 Sechium edule
SEGI_30553 Sequoiadendron giganteum
SGA_v2.0_scaffold37G14700 Striga asiatica
SMO353G0402 Selaginella moellendorffii
SMO358G0242 Selaginella moellendorffii
Solyc03g117540.4 Solanum lycopersicum
Sopen03g036450 Solanum pennellii
Sp7g16030 Schrenkiella parvula
TAR625G0397 Trochodendron aralioides
Thecc.06G042000 Theobroma cacao
Thhalv10024220m.g Eutrema salsugineum
TPR.G10871 Trifolium pratense
TPR.G19154 Trifolium pratense
TPR.G39420 Trifolium pratense
TWI18G1091 Tripterygium wilfordii
unitig_52.g17477 Utricularia gibba
vmacro19059 Vaccinium macrocarpon
VMungo1080G0885 Vigna mungo
Zm00001eb374580 Zea mays

User provided reference genes

Program Settings