Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p09180 Brassica napus
Aa31LG5G9250 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2849 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4094 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4097 Anthoceros agrestis
Actinidia38917 Actinidia chinensis
Actinidia38918 Actinidia chinensis
Ah.04g163200 Amaranthus hybridus
AL1G53850 Arabidopsis lyrata
Aqoxy5G02669 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9169VS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SX6F5A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZNEY68 Arachis hypogaea
AT1G47570 Arabidopsis thaliana
ATR0584G026 Amborella trichopoda
Atru.chr4.972 Acer truncatum
AUR62004819 Chenopodium quinoa
AUR62036036 Chenopodium quinoa
BcaB02g09339 Brassica carinata
BcaB02g09340 Brassica carinata
BcaC02g11789 Brassica carinata
BolC4t22773H Brassica oleracea
BolC4t22791H Brassica oleracea
BolC4t22792H Brassica oleracea
BolC4t22794H Brassica oleracea
BraA05t19873Z Brassica rapa
C04p11350 Brassica napus
CANSAT54G2690 Cannabis sativa
CARHR037200 Cardamine hirsuta
Carub.0001s3633 Capsella rubella
Ca_17588_v3 Cicer arietinum L.
CBR_g38543 Chara braunii
Cc07_g20930 Coffea canephora
CDE06G2483 Ceratophyllum demersum
Cfa002251 Carpinus fangiana
CiPaw.04G178100 Carya illinoinensis
ClCG04G002460 Citrullus lanatus
Cpa.g.sc138.23 Carica papaya
CsaV3_4G030320 Cucumis sativus L.
CSS0012450 Camellia sinensis var. sinensis
DCAR_009615 Daucus carota
Dinv02479 Davidia involucrata
Duzib264G1273 Durio zibethinus
ECA248G3109 Erigeron canadensis
EL10Ac4g08984 Beta vulgaris
Eucgr.I00013 Eucalyptus grandis
FAN11G0663 Fragaria x ananassa
FAN16G1494 Fragaria x ananassa
FAN21G3787 Fragaria x ananassa
FAN25G1911 Fragaria x ananassa
FvH4_3g38370 Fragaria vesca
Glyma.05G198100 Glycine max
Glyma.08G005450 Glycine max
Gohir.A05G375400 Gossypium hirsutum
Gohir.D04G040400 Gossypium hirsutum
Gorai.012G045500 Gossypium raimondii
GSVIVG01000233001 Vitis vinifera
GSVIVG01038034001 Vitis vinifera
HanXRQChr01g0017751 Helianthus annuus
HanXRQChr01g0017761 Helianthus annuus
HanXRQChr02g0035161 Helianthus annuus
HanXRQChr13g0399511 Helianthus annuus
Haze_25431 Corylus avellana
Haze_25432 Corylus avellana
Haze_25433 Corylus avellana
Haze_25436 Corylus avellana
Hma1.2p1_0057F.1_g032170 Hydrangea macrophylla
HPP92_016136 Vanilla planifolia
Hund06901 Selenicereus undatus
Lalb_Chr12g0202731 Lupinus albus
Lj4g0022315 Lotus japonicus
Lj4g0026953 Lotus japonicus
Lsat_1_v5_gn_1_78401 Lactuca sativa
Manes.12G085200 Manihot esculenta
Mapoly0003s0196 Marchantia polymorpha
MD00G1120300 Malus domestica
MD00G1120800 Malus domestica
MD03G1072300 Malus domestica
MD11G1077000 Malus domestica
MD11G1077300 Malus domestica
MD11G1077500 Malus domestica
MD11G1077800 Malus domestica
MD11G1078400 Malus domestica
MD11G1078600 Malus domestica
Medtr8g095410 Medicago truncatula
MELO3C033099.2 Cucumis melo
Migut.H00776 Erythranthe guttata
Migut.H00777 Erythranthe guttata
Migut.H00787 Erythranthe guttata
MSTRG.23507 Avicennia marina
Nitab4.5_0000004g0230 Nicotiana tabacum
Nitab4.5_0012738g0010 Nicotiana tabacum
Nn1g08418 Nelumbo nucifera
Nn6g32275 Nelumbo nucifera
Oeu011007.1 Olea europaea
Os08g0123300 Oryza sativa ssp. japonica
Os11g0175500 Oryza sativa ssp. japonica
Peaxi162Scf00030g00012 Petunia axillaris
PGR119G0951 Punica granatum
Phvul.002G279100 Phaseolus vulgaris
Potri.004G137900 Populus trichocarpa
Prupe.6G059200 Prunus persica
Psat7g040840 Pisum sativum
PSO017G1045 Papaver somniferum
PSO170G1462 Papaver somniferum
QL10p038598 Quercus lobata
RcHm_v2.0_Chr2g0157061 Rosa chinensis
RcHm_v2.0_Chr2g0157071 Rosa chinensis
RcHm_v2.0_Chr5g0068971 Rosa chinensis
Rhsim09G0131600 Rhododendron simsii
Sabra04G0089300 Salix brachista
Sc20g0000720 Simmondsia chinensis
Sed0010974 Sechium edule
SEGI_09568 Sequoiadendron giganteum
SGA_v2.0_scaffold54G19570 Striga asiatica
Solyc03g078230.3 Solanum lycopersicum
Sopen03g020950 Solanum pennellii
Sp4g18960 Schrenkiella parvula
TAR628G0290 Trochodendron aralioides
TAR628G1014 Trochodendron aralioides
THA.LOC104803663 Tarenaya hassleriana
Thecc.01G235200 Theobroma cacao
Thhalv10016597m.g Eutrema salsugineum
TPR.G12754 Trifolium pratense
TWI31G0260 Tripterygium wilfordii
unitig_62.g23450 Utricularia gibba
unitig_65.g29879 Utricularia gibba
unitig_744.g24161 Utricularia gibba
vmacro10394 Vaccinium macrocarpon
VMungo0251G0787 Vigna mungo
Zm00001eb200940 Zea mays

User provided reference genes

Program Settings