Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p66640 Brassica napus
Aa31LG2G11500 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4940 Anthoceros agrestis
Ah.06g188840 Amaranthus hybridus
AL1G65980 Arabidopsis lyrata
Aqoxy144s001 Aquilegia oxysepala
Aqoxy1G00753 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C7S1DP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LUDT77 Arachis hypogaea
AT1G56350 Arabidopsis thaliana
ATR0706G206 Amborella trichopoda
Atru.BG.131.p Acer truncatum
AUR62000671 Chenopodium quinoa
AUR62005282 Chenopodium quinoa
BcaC02g10734 Brassica carinata
BcaC06g31771 Brassica carinata
BolC4t24075H Brassica oleracea
BraA03t15722Z Brassica rapa
C04p27150 Brassica napus
CAN.G1715.4 Capsicum annuum
CANSAT54G1215 Cannabis sativa
CARHR055350 Cardamine hirsuta
Carub.0002s0779 Capsella rubella
Ca_09300_v3 Cicer arietinum L.
Cc02_g34960 Coffea canephora
CDE01G0522 Ceratophyllum demersum
Cfa006698 Carpinus fangiana
Ciclev10000955m.g Citrus clementina
CiPaw.07G029100 Carya illinoinensis
ClCG03G017680 Citrullus lanatus
COL.COLO4_04155 Corchorus olitorius
Cpa.g.sc48.155 Carica papaya
CsaV3_1G038310 Cucumis sativus L.
CSS0003470 Camellia sinensis var. sinensis
CSS0020791 Camellia sinensis var. sinensis
CSS0046553 Camellia sinensis var. sinensis
DCAR_025276 Daucus carota
Dinv24435 Davidia involucrata
Duzib177G0460 Durio zibethinus
EL10Ac4g09821 Beta vulgaris
Eucgr.H03286 Eucalyptus grandis
FAN02G2468 Fragaria x ananassa
FAN05G1868 Fragaria x ananassa
FAN09G3274 Fragaria x ananassa
FAN14G3268 Fragaria x ananassa
FvH4_6g07390 Fragaria vesca
Glyma.03G231500 Glycine max
Glyma.19G228600 Glycine max
Gohir.A08G206100 Gossypium hirsutum
Gohir.D08G222900 Gossypium hirsutum
Gorai.004G236800 Gossypium raimondii
GSVIVG01031232001 Vitis vinifera
HanXRQChr04g0096301 Helianthus annuus
Haze_04069 Corylus avellana
Haze_27410 Corylus avellana
Hma1.2p1_0008F-1.1_g005660 Hydrangea macrophylla
Hma1.2p1_0008F-1.1_g005670 Hydrangea macrophylla
HPP92_003744 Vanilla planifolia
HPP92_003762 Vanilla planifolia
Hund07142 Selenicereus undatus
Lalb_Chr18g0046081 Lupinus albus
Lj1g0007632 Lotus japonicus
Lj4g0002014 Lotus japonicus
Lju926A9G33 Lonicera japonica
Lsat_1_v5_gn_7_74521 Lactuca sativa
Manes.08G111800 Manihot esculenta
Mapoly0011s0200 Marchantia polymorpha
MBI18_g31674_MAGBIO Magnolia biondii
MD04G1193500 Malus domestica
MD04G1193600 Malus domestica
MD04G1193700 Malus domestica
MD12G1206300 Malus domestica
Medtr7g112100 Medicago truncatula
MELO3C015260.2 Cucumis melo
Migut.C00728 Erythranthe guttata
MSTRG.27943 Avicennia marina
Nitab4.5_0000368g0140 Nicotiana tabacum
Nitab4.5_0004873g0060 Nicotiana tabacum
Nn3g21681 Nelumbo nucifera
Nn4g25606 Nelumbo nucifera
Nn4g25607 Nelumbo nucifera
Nn4g25608 Nelumbo nucifera
Oeu000013.1 Olea europaea
Oeu023924.1 Olea europaea
Oeu039502.1 Olea europaea
Os03g0305700 Oryza sativa ssp. japonica
Peaxi162Scf00673g00320 Petunia axillaris
PGR031G0820 Punica granatum
PGSC0003DMG401002803 Solanum tuberosum
Phvul.001G225200 Phaseolus vulgaris
Potri.013G009200 Populus trichocarpa
Pp3c21_10940 Physcomitrium patens
Prupe.6G313600 Prunus persica
Psat3g012840 Pisum sativum
PSO170G2861 Papaver somniferum
PSO357G0676 Papaver somniferum
QL03p013475 Quercus lobata
QL03p040031 Quercus lobata
RcHm_v2.0_Chr3g0456991 Rosa chinensis
Rhsim11G0094700 Rhododendron simsii
Sabra13G0007800 Salix brachista
SalBow3G1034 Salvia bowleyana
SalBow5G0353 Salvia bowleyana
SalBow5G0603 Salvia bowleyana
SalBow5G2095 Salvia bowleyana
SalBow5G4231 Salvia bowleyana
SalBow5G4336 Salvia bowleyana
SalBow5G4778 Salvia bowleyana
SalBow5G5270 Salvia bowleyana
Sc09g0002650 Simmondsia chinensis
Sed0020329 Sechium edule
SEGI_05234 Sequoiadendron giganteum
SEGI_22364 Sequoiadendron giganteum
SEGI_33328 Sequoiadendron giganteum
SEGI_34635 Sequoiadendron giganteum
SEGI_37907 Sequoiadendron giganteum
SGA_v2.0_scaffold5G02885 Striga asiatica
SMO367G0410 Selaginella moellendorffii
Solyc01g100420.3 Solanum lycopersicum
Sopen01g043940 Solanum pennellii
Sp2g06480 Schrenkiella parvula
TAR362G0798 Trochodendron aralioides
THA.LOC104816887 Tarenaya hassleriana
Thecc.05G322100 Theobroma cacao
Thhalv10023424m.g Eutrema salsugineum
TPR.G1660 Trifolium pratense
TWI36G1697 Tripterygium wilfordii
unitig_52.g17413 Utricularia gibba
vmacro01558 Vaccinium macrocarpon
VMungo1383G1817 Vigna mungo
Zm00001eb257380 Zea mays

User provided reference genes

Program Settings