Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p36550 Brassica napus
Aa31LG8G160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.297 Anthoceros agrestis
Actinidia07351 Actinidia chinensis
Actinidia31526 Actinidia chinensis
AL3G24620 Arabidopsis lyrata
Aqoxy3G00134 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5TU0IR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WY48MC Arachis hypogaea
AT3G12940 Arabidopsis thaliana
ATR0763G216 Amborella trichopoda
Atru.chr2.1758 Acer truncatum
AUR62043219 Chenopodium quinoa
AUR62043840 Chenopodium quinoa
BcaB06g25498 Brassica carinata
BcaC05g29222 Brassica carinata
BolC5t34166H Brassica oleracea
BraA05t22455Z Brassica rapa
C05p54970 Brassica napus
CAN.G337.144 Capsicum annuum
CAN.G943.38 Capsicum annuum
CANSAT80G1626 Cannabis sativa
CARHR087460 Cardamine hirsuta
Carub.0005s0925 Capsella rubella
Ca_27849_v3 Cicer arietinum L.
Cc05_g16070 Coffea canephora
CDE05G2624 Ceratophyllum demersum
Ciclev10019785m.g Citrus clementina
CiPaw.12G005900 Carya illinoinensis
ClCG11G016450 Citrullus lanatus
Cpa.g.sc10.48 Carica papaya
CsaV3_4G031890 Cucumis sativus L.
CSS0015787 Camellia sinensis var. sinensis
CSS0023682 Camellia sinensis var. sinensis
DCAR_008882 Daucus carota
DCAR_009640 Daucus carota
Dinv19618 Davidia involucrata
Dinv42510 Davidia involucrata
Duzib187G0458 Durio zibethinus
Duzib268G0553 Durio zibethinus
Duzib268G1161 Durio zibethinus
ECA236G5124 Erigeron canadensis
EL10Ac8g20403 Beta vulgaris
Eucgr.F01456 Eucalyptus grandis
FAN11G1576 Fragaria x ananassa
FAN16G1111 Fragaria x ananassa
FAN21G2787 Fragaria x ananassa
FAN25G0975 Fragaria x ananassa
FAN25G3013 Fragaria x ananassa
FvH4_3g15740 Fragaria vesca
Glyma.08G172100 Glycine max
Glyma.15G255600 Glycine max
Gohir.A01G039300 Gossypium hirsutum
Gohir.A11G291600 Gossypium hirsutum
Gohir.D01G027000 Gossypium hirsutum
Gohir.D11G300700 Gossypium hirsutum
Gorai.002G036400 Gossypium raimondii
Gorai.007G335700 Gossypium raimondii
Gorai.007G335900 Gossypium raimondii
GSVIVG01020422001 Vitis vinifera
HanXRQChr06g0183061 Helianthus annuus
Haze_08538 Corylus avellana
HPP92_001849 Vanilla planifolia
Lalb_Chr03g0031801 Lupinus albus
Lj3g0000732 Lotus japonicus
Lj4A318T19 Lonicera japonica
Lsat_1_v5_gn_7_112141 Lactuca sativa
Manes.06G171900 Manihot esculenta
Manes.14G016300 Manihot esculenta
Mapoly0052s0101 Marchantia polymorpha
MD00G1150800 Malus domestica
MD00G1150900 Malus domestica
MD00G1151000 Malus domestica
MD05G1230900 Malus domestica
MD05G1231000 Malus domestica
MD05G1231200 Malus domestica
MD05G1231300 Malus domestica
MD05G1232200 Malus domestica
MD05G1232500 Malus domestica
MD10G1202600 Malus domestica
Medtr2g069480 Medicago truncatula
MELO3C026966.2 Cucumis melo
Migut.H01694 Erythranthe guttata
MSTRG.15021 Avicennia marina
Nitab4.5_0001080g0040 Nicotiana tabacum
Nitab4.5_0001749g0020 Nicotiana tabacum
Oeu052005.1 Olea europaea
Os07g0496900 Oryza sativa ssp. japonica
Peaxi162Scf00452g00834 Petunia axillaris
PGR083G0039 Punica granatum
PGSC0003DMG400022235 Solanum tuberosum
Phvul.005G057000 Phaseolus vulgaris
Potri.011G143000 Populus trichocarpa
Pp3c10_7420 Physcomitrium patens
Pp3c14_8770 Physcomitrium patens
Pp3c1_30960 Physcomitrium patens
Pp3c2_6360 Physcomitrium patens
Pp3c3_5660 Physcomitrium patens
Prupe.4G139600 Prunus persica
Psat1g010960 Pisum sativum
Psat1g011120 Pisum sativum
Psat4g203240 Pisum sativum
PSO675G6286 Papaver somniferum
QL04p073268 Quercus lobata
RcHm_v2.0_Chr5g0026471 Rosa chinensis
RcHm_v2.0_Chr5g0026521 Rosa chinensis
Rhsim06G0238900 Rhododendron simsii
Sabra11G0127900 Salix brachista
SalBow1G5095 Salvia bowleyana
SalBow1G8023 Salvia bowleyana
Sc20g0002900 Simmondsia chinensis
Sed0026267 Sechium edule
Sed0028189 Sechium edule
SGA_v2.0_scaffold713G53504 Striga asiatica
SHI21454 Sapria himalayana
SMO165G0122 Selaginella moellendorffii
Solyc07g066450.4 Solanum lycopersicum
Sopen07g034630 Solanum pennellii
Sp3g11080 Schrenkiella parvula
TAR627G1186 Trochodendron aralioides
THA.LOC104815713 Tarenaya hassleriana
Thecc.07G152600 Theobroma cacao
Thhalv10022429m.g Eutrema salsugineum
TPR.G9747 Trifolium pratense
TWI38G0191 Tripterygium wilfordii
unitig_21.g20254 Utricularia gibba
vmacro07870 Vaccinium macrocarpon
vmacro11664 Vaccinium macrocarpon
vmacro13700 Vaccinium macrocarpon
VMungo1080G0392 Vigna mungo
Zm00001eb105490 Zea mays
Zm00001eb321950 Zea mays

User provided reference genes

Program Settings